6CI6

Crystal structure of equine serum albumin in complex with nabumetone


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of equine serum albumin in complex with nabumetone

Venkataramany, B.S.Czub, M.P.Shabalin, I.G.Handing, K.B.Steen, E.H.Cooper, D.R.Joachimiak, A.J.Satchell, K.J.F.Minor, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Serum albumin
A
583Equus caballusMutation(s): 0 
Gene Names: ALB
Find proteins for P35747 (Equus caballus)
Go to Gene View: ALB
Go to UniProtKB:  P35747
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
KNA
Query on KNA

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Download CCD File 
A
nonanoic acid
C9 H18 O2
FBUKVWPVBMHYJY-UHFFFAOYSA-N
 Ligand Interaction
UNX
Query on UNX

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Download CCD File 
A
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
NBO
Query on NBO

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Download CCD File 
A
nabumetone
4-(6-methoxynaphthalen-2-yl)butan-2-one
C15 H16 O2
BLXXJMDCKKHMKV-UHFFFAOYSA-N
 Ligand Interaction
TRS
Query on TRS

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Download CCD File 
A
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 93.879α = 90.00
b = 93.879β = 90.00
c = 140.787γ = 120.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
REFMACrefinement
HKL-3000data reduction
PDB_EXTRACTdata extraction
HKL-3000phasing
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited States--

Revision History 

  • Version 1.0: 2018-03-07
    Type: Initial release