6CG8

Structure of C. crescentus GapR-DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.299 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.249 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.

Guo, M.S.Haakonsen, D.L.Zeng, W.Schumacher, M.A.Laub, M.T.

(2018) Cell 175: 583


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
UPF0335 protein B7Z12_12435
A, B, D, E
78Caulobacter vibrioidesMutation(s): 0 
Find proteins for A0A258D3B4 (Caulobacter vibrioides)
Go to UniProtKB:  A0A258D3B4
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(*TP*TP*AP*AP*AP*AP*TP*TP*AP*AP*A)-3')C11synthetic construct
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(*TP*TP*TP*AP*AP*TP*TP*TP*TP*AP*A)-3')F11synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.299 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.249 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 95.913α = 90.00
b = 35.579β = 90.18
c = 115.559γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
AutoSolphasing
MOSFLMdata reduction
SCALAdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-02-19 
  • Released Date: 2018-09-26 
  • Deposition Author(s): Schumacher, M.A.

Revision History 

  • Version 1.0: 2018-09-26
    Type: Initial release
  • Version 1.1: 2018-10-17
    Type: Data collection, Database references