6CDX

High-resolution crystal structure of fluoropropylated cystine knot, binding to alpha-5 beta-6 integrin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

High-resolution crystal structure of fluoropropylated cystine knot, binding to alpha-5 beta-6 integrin

Kimura, R.Gambhir, S.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
cystine knot (fluoropropylated)
A, B
37Momordica cochinchinensisMutation(s): 0 
Find proteins for P82408 (Momordica cochinchinensis)
Go to UniProtKB:  P82408
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
4LT
Query on 4LT
A, B
NON-POLYMERC3 H5 F O2

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.203 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 16.950α = 90.00
b = 44.250β = 90.00
c = 66.410γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata scaling
PHASERphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Federal Ministry for Education and ResearchGermanyDJUSA
National Institutes of Health/National Cancer InstituteUnited StatesCA154887
The University Grants Committee, Research Grants Council (RGC)United StatesCRN-17-427258

Revision History 

  • Version 1.0: 2019-08-14
    Type: Initial release