6CC4

Structure of MurJ from Escherichia coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.301 
  • R-Value Work: 0.280 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure and mutagenic analysis of the lipid II flippase MurJ fromEscherichia coli.

Zheng, S.Sham, L.T.Rubino, F.A.Brock, K.P.Robins, W.P.Mekalanos, J.J.Marks, D.S.Bernhardt, T.G.Kruse, A.C.

(2018) Proc. Natl. Acad. Sci. U.S.A. 115: 6709-6714


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
soluble cytochrome b562, lipid II flippase MurJ chimera
A
614Escherichia coli (strain K12)Escherichia coli
This entity is chimeric
Mutation(s): 0 
Gene Names: murJ (mviN, yceN), cybC
Membrane protein
mpstruct
Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL
Sub Group: 
Multi-Drug Efflux Transporters
Protein: 
MurJ lipid II flippase
Find proteins for P0AF16 (Escherichia coli (strain K12))
Go to UniProtKB:  P0AF16
Find proteins for P0ABE7 (Escherichia coli)
Go to UniProtKB:  P0ABE7
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.301 
  • R-Value Work: 0.280 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 113.954α = 90.00
b = 118.036β = 90.00
c = 128.067γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
MR-Rosettaphasing
HKL-2000data reduction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2018-02-05 
  • Released Date: 2018-06-27 
  • Deposition Author(s): Zheng, S., Kruse, A.C.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesU19AI109764

Revision History 

  • Version 1.0: 2018-06-27
    Type: Initial release
  • Version 1.1: 2018-07-04
    Type: Data collection, Database references