6C3U

Crystal structure of Klebsiella pneumoniae fosfomycin resistance protein (FosAKP) with inhibitor (ANY2) bound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.184 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Small molecule inhibitor of FosA expands fosfomycin activity to multidrug-resistant Gram-negative pathogens.

Tomich, A.D.Klontz, E.H.Deredge, D.Barnard, J.P.McElheny, C.L.Eshbach, M.L.Weisz, O.A.Wintrode, P.Doi, Y.Sundberg, E.J.Sluis-Cremer, N.

(2019) Antimicrob. Agents Chemother. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
FosA family fosfomycin resistance glutathione transferase
A, B, C, D
145Klebsiella pneumoniaeMutation(s): 0 
Gene Names: fosA
EC: 2.5.1.18
Find proteins for A0A086IRG1 (Klebsiella pneumoniae)
Go to UniProtKB:  A0A086IRG1
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NY2
Query on NY2

Download SDF File 
Download CCD File 
A, D
3-bromo-6-(4-nitro-1H-pyrazol-3-yl)pyrazolo[1,5-a]pyrimidin-2(1H)-one
C9 H5 Br N6 O3
GPUSMPJXAIFKFV-UHFFFAOYSA-N
 Ligand Interaction
MN
Query on MN

Download SDF File 
Download CCD File 
A, B, C, D
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.184 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 44.765α = 90.00
b = 68.837β = 90.46
c = 90.312γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
MOLREPphasing
PDB_EXTRACTdata extraction
XDSdata reduction
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-12-26
    Type: Initial release
  • Version 1.1: 2019-01-30
    Type: Data collection, Database references