6BYQ

Crystal structure of Tyrosine-tRNA ligase from Helicobacter pylori G27


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.209 
  • R-Value Work: 0.178 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of Tyrosine-tRNA ligase from Helicobacter pylori G27

Abendroth, J.Dranow, D.M.Lorimer, D.D.Edwards, T.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tyrosine--tRNA ligase
A
410Helicobacter pylori (strain G27)Mutation(s): 0 
Gene Names: tyrS
EC: 6.1.1.1
Find proteins for B5Z7D7 (Helicobacter pylori (strain G27))
Go to UniProtKB:  B5Z7D7
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
IPA
Query on IPA

Download SDF File 
Download CCD File 
A
ISOPROPYL ALCOHOL
2-PROPANOL
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 121.400α = 90.00
b = 43.360β = 121.21
c = 113.700γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
MoRDaphasing
SIMBADphasing
XDSdata reduction
XSCALEdata scaling
Cootmodel building
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-03-21
    Type: Initial release