6BWE

Sortase A from Corynebacterium diphtheriae, lid mutant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.171 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

In vitro reconstitution of sortase-catalyzed pilus polymerization reveals structural elements involved in pilin cross-linking.

Chang, C.Amer, B.R.Osipiuk, J.McConnell, S.A.Huang, I.H.Hsieh, V.Fu, J.Nguyen, H.H.Muroski, J.Flores, E.Ogorzalek Loo, R.R.Loo, J.A.Putkey, J.A.Joachimiak, A.Das, A.Clubb, R.T.Ton-That, H.

(2018) Proc. Natl. Acad. Sci. U.S.A. 115: E5477-E5486


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative fimbrial associated sortase-like protein
A, B
215Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)Mutation(s): 2 
Find proteins for Q6NF82 (Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis))
Go to UniProtKB:  Q6NF82
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CSO
Query on CSO
A, B
L-PEPTIDE LINKINGC3 H7 N O3 SCYS
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 65.193α = 90.00
b = 45.497β = 96.37
c = 74.880γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data scaling
REFMACrefinement
PDB_EXTRACTdata extraction
MOLREPphasing
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesHHSN272200700058C
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesHHSN272201200026C

Revision History 

  • Version 1.0: 2017-12-27
    Type: Initial release
  • Version 1.1: 2018-01-17
    Type: Author supporting evidence
  • Version 1.2: 2018-05-30
    Type: Data collection, Database references
  • Version 1.3: 2018-06-13
    Type: Data collection, Database references
  • Version 1.4: 2018-06-20
    Type: Data collection, Database references