6BSF

Human GR (418-507) in complex with monomeric DNA binding site


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.206 
  • R-Value Observed: 0.207 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

General and sequence-specific roles for DNA in glucocorticoid receptor DNA-binding stoichiometry

Pufall, M.A.

To be published.

Macromolecules

Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Glucocorticoid receptorD [auth A], A [auth B]91Homo sapiensMutation(s): 0 
Gene Names: NR3C1GRL
UniProt
Find proteins for P79269 (Saguinus oedipus)
Explore P79269 
Go to UniProtKB:  P79269
Protein Feature View
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  • Reference Sequence
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 2
    MoleculeChainsLengthOrganismImage
    DNA (5'-D(P*TP*GP*CP*AP*AP*AP*TP*GP*TP*AP*CP*TP*AP*GP*CP*T)-3')B [auth C]16synthetic construct
    Protein Feature View
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    • Reference Sequence
    • Find similar nucleic acids by:  Sequence   |   Structure
    • Entity ID: 3
      MoleculeChainsLengthOrganismImage
      DNA (5'-D(P*AP*AP*GP*CP*TP*AP*GP*TP*AP*CP*AP*TP*TP*TP*GP*C)-3')C [auth D]16synthetic construct
      Protein Feature View
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      • Reference Sequence
      Small Molecules
      Experimental Data & Validation

      Experimental Data

      • Method: X-RAY DIFFRACTION
      • Resolution: 2.40 Å
      • R-Value Free: 0.233 
      • R-Value Work: 0.206 
      • R-Value Observed: 0.207 
      • Space Group: P 21 21 21
      Unit Cell:
      Length ( Å )Angle ( ˚ )
      a = 38.345α = 90
      b = 87.907β = 90
      c = 103.702γ = 90
      Software Package:
      Software NamePurpose
      PHENIXrefinement
      XDSdata reduction
      Aimlessdata scaling
      PHASERphasing

      Structure Validation

      View Full Validation Report




      Entry History & Funding Information

      Deposition Data

      • Deposited Date: 2017-12-02 
      • Released Date: 2018-12-05 
      • Deposition Author(s): Pufall, M.A.

      Funding OrganizationLocationGrant Number
      National Science Foundation (NSF, United States)United StatesCAREER grant 1552862
      National Institutes of Health/National Cancer Institute (NIH/NCI)United StatesK99/R00 CA149088

      Revision History  (Full details and data files)

      • Version 1.0: 2018-12-05
        Type: Initial release
      • Version 1.1: 2019-11-27
        Changes: Author supporting evidence
      • Version 1.2: 2021-08-18
        Changes: Database references, Source and taxonomy