6BNM

Crystal Structure of the P-Rex2 PH domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.191 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of the P-Rex2 PH domain

Cash, J.N.Sharma, P.V.Tesmer, J.J.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein
A
162Homo sapiensMutation(s): 0 
Gene Names: PREX2 (DEPDC2)
Find proteins for Q70Z35 (Homo sapiens)
Go to Gene View: PREX2
Go to UniProtKB:  Q70Z35
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.191 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 60.105α = 90.00
b = 60.105β = 90.00
c = 86.238γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data collection
REFMACrefinement
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
PHASERphasing
Cootmodel building
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Heart, Lung, and Blood InstituteUnited StatesHL086865
National Institutes of Health/National Heart, Lung, and Blood InstituteUnited StatesHL122416
American Cancer Society-Michigan Cancer Research FundUnited StatesPF-14-224-01-DMC

Revision History 

  • Version 1.0: 2018-11-21
    Type: Initial release