6BND

Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, Thr315Ala mutant mono-zinc and phosphoethanolamine complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.66 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.151 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Substrate Recognition by a Colistin Resistance Enzyme from Moraxella catarrhalis.

Stogios, P.J.Cox, G.Zubyk, H.L.Evdokimova, E.Wawrzak, Z.Wright, G.D.Savchenko, A.

(2018) ACS Chem. Biol. 13: 1322-1332


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phosphoethanolamine transferase
A, B
344Moraxella sp. HMSC061H09Mutation(s): 1 
Find proteins for A0A1E9VP98 (Moraxella sp. HMSC061H09)
Go to UniProtKB:  A0A1E9VP98
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
OPE
Query on OPE

Download SDF File 
Download CCD File 
A, B
PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
COLAMINE PHOSPHORIC ACID
C2 H8 N O4 P
SUHOOTKUPISOBE-UHFFFAOYSA-N
 Ligand Interaction
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
15P
Query on 15P

Download SDF File 
Download CCD File 
A, B
POLYETHYLENE GLYCOL (N=34)
PEG 1500
C69 H140 O35
VUYXVWGKCKTUMF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.66 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.151 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 74.520α = 90.00
b = 155.240β = 90.00
c = 66.410γ = 90.00
Software Package:
Software NamePurpose
Cootmodel building
PHENIXphasing
XDSdata reduction
PHENIXrefinement
PHENIXmodel building
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesHHSN272201200026C
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesHHSN272201200060C

Revision History 

  • Version 1.0: 2018-01-31
    Type: Initial release
  • Version 1.1: 2018-02-14
    Type: Author supporting evidence
  • Version 1.2: 2018-04-25
    Type: Data collection, Database references
  • Version 1.3: 2018-05-30
    Type: Data collection, Database references