6BJV

CIRV p19 protein in complex with siRNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.198 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.260 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural examination of p19 mutants with high affinity for human miRNA-122

Foss, D.V.Schirle, N.T.MacRae, I.J.Pezacki, J.P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RNA silencing suppressor p19
A, B
172Carnation Italian ringspot virusMutation(s): 0 
Find proteins for Q66104 (Carnation Italian ringspot virus)
Go to UniProtKB:  Q66104
Entity ID: 2
MoleculeChainsLengthOrganism
RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3')C21Lampyridae
Entity ID: 3
MoleculeChainsLengthOrganism
RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3')D21Lampyridae
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.198 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.260 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 46.586α = 109.44
b = 46.997β = 111.11
c = 54.883γ = 96.78
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
SCALAdata scaling
PDB_EXTRACTdata extraction
PHENIXphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-01-16
    Type: Initial release