6BI5 | pdb_00006bi5

NMR solution structure of Defensin1 from Centruroides limpidus limpidus

PDB DOI: https://doi.org/10.2210/pdb6BI5/pdb
BMRB: 30351

Classification: TOXIN
Organism(s): Centruroides limpidus
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2017-10-31 Released: 2018-09-26
Deposition Author(s): Escobedo-Gonzalez, F.C., del Rio-Portilla, F., Rodriguez-Solano, L.A.
Funding Organization(s): Direccion General de Asuntos del Personal Academico, UNAM

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 500
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history.

Literature

From good defence into mortal risk: NMR studyand conversion of a defensin into a neurotoxin

Escobedo-Gonzalez, F.C., del Rio-Portilla, F., Franco-Bodek, D., Rodriguez-de la Vega, R., Carrillo-Flores, E., Rodriguez-Solano, L.A., Flores-Solis, D., Garaza-Garcia, A., Titaux-Delgado, G.A., Lopez-Vera, E.

To be published.

Macromolecule Content

Total Structure Weight: 3.61 kDa
Atom Count: 248
Modeled Residue Count: 31
Deposited Residue Count: 31
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Defensin-1	A	31	Centruroides limpidus	Mutation(s): 2
UniProt
Find proteins for Q6GU94 (Centruroides limpidus) Explore Q6GU94 Go to UniProtKB: Q6GU94
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q6GU94
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 500
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2018-09-26

Deposition Author(s):

Escobedo-Gonzalez, F.C.

del Rio-Portilla, F.

Rodriguez-Solano, L.A.

Funding Organization	Location	Grant Number
Direccion General de Asuntos del Personal Academico, UNAM	Mexico	IN207516

Revision History (Full details and data files)

Version 1.0: 2018-09-26
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.2: 2024-11-06
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.