6BAQ

Mus musculus BPIFA1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50261 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.221 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of the mouse innate immunity factor bacterial permeability-increasing family member A1.

Little, M.S.Redinbo, M.R.

(2018) Acta Crystallogr F Struct Biol Commun 74: 268-276


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
BPI fold-containing family A member 1
A, B, C, D, E, F, G, H
244Mus musculusMutation(s): 0 
Gene Names: Bpifa1 (Plunc, Splunc1)
Find proteins for P97361 (Mus musculus)
Go to UniProtKB:  P97361
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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Download CCD File 
B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
C, G, H
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50261 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.221 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 132.200α = 90.00
b = 200.582β = 126.15
c = 89.499γ = 90.00
Software Package:
Software NamePurpose
PHENIXmodel building
PHENIXrefinement
PHASERphasing
HKL-2000data scaling
Cootrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
United States--

Revision History 

  • Version 1.0: 2018-05-09
    Type: Initial release
  • Version 1.1: 2018-12-19
    Type: Data collection, Database references