6B8F

Contracted Human Heavy-Chain Ferritin Crystal-Hydrogel Hybrid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.06 Å
  • R-Value Free: 0.103 
  • R-Value Work: 0.091 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Hyperexpandable, self-healing macromolecular crystals with integrated polymer networks.

Zhang, L.Bailey, J.B.Subramanian, R.H.Tezcan, F.A.

(2018) Nature 557: 86-91

  • DOI: 10.1038/s41586-018-0057-7
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • The formation of condensed matter typically involves a trade-off between structural order and flexibility. As the extent and directionality of interactions between atomic or molecular components increase, materials generally become more ordered but l ...

    The formation of condensed matter typically involves a trade-off between structural order and flexibility. As the extent and directionality of interactions between atomic or molecular components increase, materials generally become more ordered but less compliant, and vice versa. Nevertheless, high levels of structural order and flexibility are not necessarily mutually exclusive; there are many biological (such as microtubules 1,2 , flagella 3 , viruses 4,5 ) and synthetic assemblies (for example, dynamic molecular crystals 6-9 and frameworks 10-13 ) that can undergo considerable structural transformations without losing their crystalline order and that have remarkable mechanical properties 8,14,15 that are useful in diverse applications, such as selective sorption 16 , separation 17 , sensing 18 and mechanoactuation 19 . However, the extent of structural changes and the elasticity of such flexible crystals are constrained by the necessity to maintain a continuous network of bonding interactions between the constituents of the lattice. Consequently, even the most dynamic porous materials tend to be brittle and isolated as microcrystalline powders 14 , whereas flexible organic or inorganic molecular crystals cannot expand without fracturing. Owing to their rigidity, crystalline materials rarely display self-healing behaviour 20 . Here we report that macromolecular ferritin crystals with integrated hydrogel polymers can isotropically expand to 180 per cent of their original dimensions and more than 500 per cent of their original volume while retaining periodic order and faceted Wulff morphologies. Even after the separation of neighbouring ferritin molecules by 50 ångströms upon lattice expansion, specific molecular contacts between them can be reformed upon lattice contraction, resulting in the recovery of atomic-level periodicity and the highest-resolution ferritin structure reported so far. Dynamic bonding interactions between the hydrogel network and the ferritin molecules endow the crystals with the ability to resist fragmentation and self-heal efficiently, whereas the chemical tailorability of the ferritin molecules enables the creation of chemically and mechanically differentiated domains within single crystals.


    Organizational Affiliation

    Department of Integrative Biology, Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS, INSERM, UdS, 1 rue Laurent Fries, 67404, Illkirch CEDEX, France.,Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autònoma de Barcelona, E-08193 Cerdanyola del Vallès, Spain. Electronic address: Guillem.Prats.Ejarque@uab.cat.,Department of Cell Biology and Physiology, Washington University, St. Louis, MO, 63110, USA.,Department of Pharmacy, University of Patras, GR-26504 Patras, Greece. Electronic address: G.A.Spyroulias@upatras.gr.,PRESTO, JST, Nagoya 464-8601, Japan.,Department of Chemistry, University of York, Heslington, York, YO10 5DD, United Kingdom.,RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan.,Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA. droberto@pennmedicine.upenn.edu.,Institute for Advanced Study and State Key Laboratory of Molecular Neuroscience , The Hong Kong University of Science and Technology , Clear Water Bay , Kowloon , Hong Kong SAR , China.,Center for Electron Microscopy Research, Korea Basic Science Institute, Ochang, Chungbuk, 28119, Republic of Korea.,School of Pharmacy, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK. j.angulo@uea.ac.uk.,Institute of Catalysis and Petrochemistry, CSIC, C/ Marie Curie, 2, Cantoblanco, 28049, Madrid, Spain.,Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autònoma de Barcelona, E-08193 Cerdanyola del Vallès, Spain. Electronic address: Mohammed.Moussaoui@uab.cat.,Department of Biology and Chemistry , City University of Hong Kong , 83 Tat Chee Avenue , Kowloon Tong , Hong Kong SAR , China.,Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Spain.,Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh, India.,Severance Biomedical Science Institute and Institute for Immunology and Immunological Diseases, Yonsei University College of Medicine, 50-1 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea. jsshin6203@yuhs.ac.,Department of Molecular Biology, Centre for Molecular Biology Severo Ochoa (CSIC-UAM), University Autonomous from Madrid, C/ Nicolás Cabrera, 1, Cantoblanco, 28049, Madrid, Spain. mfernandez@cbm.csic.es.,GlaxoSmithKline R&D, Medicines Research Centre , Gunnels Wood Road , SG1 2NY Stevenage , U.K.,Laboratoire d'Innovation Moléculaire et Applications, Université de Strasbourg|, Université de Haute-Alsace|, CNRS|, LIMA (UMR 7042), Equipe de Synthèse Organique et Molécules Bioactives (SYBIO), ECPM, 25 rue Becquerel, 67000, Strasbourg, France.,New England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.,School of Cellular & Molecular Medicine , University of Bristol , Bristol BS8 1TD , U.K.,Department of Agricultural Biotechnology and Center for Food Safety and Toxicology, Seoul National University, Seoul, 08826, South Korea.,Shandong Institute of Parasitic Diseases, Shandong Academy of Medical Sciences, Jining, China.,Infection and Immunity Research Laboratory, Metabolic Regulation Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, South Korea.,Department of Chemistry, Bryn Mawr College, Bryn Mawr, PA, United States of America.,Department of Chemistry , The Hong Kong University of Science and Technology , Clear Water Bay , Kowloon , Hong Kong SAR , China.,Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea. hscho8@yonsei.ac.kr.,Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.,Cell Adhesion Laboratory, Department of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, United States.,Division of Agronomy and Horticultural Science, Graduate School of Agriculture, Kyoto University, Uji-shi, Japan.,School of Pharmacy, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.,Center for Inflammation Research, University of Texas Southwestern Medical Center, Dallas, TX, USA. Zhijian.Chen@UTSouthwestern.edu.,Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA.,Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, China.,Molecular Biology and Structural Biology Programs, Sloan-Kettering Institute, New York, NY, 10065, USA. s-shuman@ski.mskcc.org.,Structural Biology Program , Memorial Sloan-Kettering Cancer Center , New York , NY , USA . Email: v.kuryavyi@gmail.com.,Institute of Biology, Westlake Institute for Advanced Study, Hangzhou, China. shi-lab@tsinghua.edu.cn.,Department of Microbiology and Molecular Genetics, University of Texas Health Science Center, Houston, Texas, USA.,Department of Dermatology, Yale University, New Haven, CT, USA christopher.bunick@yale.edu.,School of Biological Sciences, Seoul National University, Seoul, 08826, South Korea.,Department of Genetic, University of Sevilla, Avenida Reina Mercedes s/n, 41012, Seville, Spain.,UVE: Aix-Marseille Univ-IRD 190-Inserm 27-IHU Méditerranée Infection, Marseille, France.,National Center for Protein Science Shanghai, State Key Laboratory of Molecular Biology, CAS Center for Excellence on Molecular Cell Science, Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, University of Chinese Academy of Sciences, 200031, Shanghai, China.,Department of Chemistry and Biology "A. Zambelli", University of Salerno, Via Giovanni Paolo II, 132, 84084, Fisciano, Salerno, Italy.,National Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, 430072, Wuhan, China.,Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.,Cambridge Institute for Medical Research and Department of Haematology, University of Cambridge, Wellcome Trust/MRC Building, Hills Road, Cambridge CB2 0XY, England.,Department of Biophysics, All India Institute of Medical Sciences, Ansari Nagar, New Delhi 110 029, India tpsingh.aiims@gmail.com.,Department of Bioengineering, Stanford University, Stanford, CA, USA.,Department of Biology , University of Waterloo , Waterloo , Ontario , Canada N2L 3G1.,Institute of Biology, Westlake Institute for Advanced Study, Hangzhou, China.,Department of Chemistry, College of Science , University of Hail , Saudi Arabia.,Shanghai Institute of Precision Medicine, 200125, Shanghai, China. huangchh@shsmu.edu.cn.,Graduate School of Medical Life Science, Yokohama City University, 1-7-29, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.,Division of Life Science , The Hong Kong University of Science and Technology , Clear Water Bay , Kowloon , Hong Kong SAR , China . Email: gzhu@ust.hk.,Department of Pharmacy, Seoul National University, Seoul, 08826, South Korea.,Key laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine, 200025, Shanghai, China. leim@shsmu.edu.cn.,Department of Biochemistry and Molecular Biology, SUNY Upstate Medical University, Syracuse, NY 13210, USA.,Department of Physiology and Systems Bioscience, Kyoto Prefectural University of Medicine, Kyoto 602-8566, Japan.,Institute of Transformative Bio-Molecules, Nagoya University, Nagoya 464-8601, Japan.,The Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas, 66045.,Section of Structural Biology, Department of Medicine, Imperial College London, London SW7 2AZ, UK. Electronic address: d.wigley@imperial.ac.uk.,Department of Biochemistry, University of Washington, Seattle, WA, USA.,Molecular Biology and Structural Biology Programs, Sloan-Kettering Institute, New York, NY, 10065, USA.,Department of Microbiology and Molecular Genetics, University of Texas Health Science Center, Houston, Texas, USA rclubb@mbi.ucla.edu htonthat@dentistry.ucla.edu.,Instituto de Física de Líquidos y Sistemas Biológicos, CONICET, UNLP, Calle 59 No. 789, La Plata, Argentina.,Department of Chemistry and Biochemistry , Laurentian University , Sudbury , Ontario , Canada P3E 2C6.,School of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Republic of Korea.,2National Institute of Biological Sciences, Beijing, 102206 China.,Department of Stem Cell Biology and Medicine/Cancer Stem Cell Research, Kyushu University Graduate School of Medical Sciences, Fukuoka 812-8582, Japan.,Department of Molecular Biology, Centre for Molecular Biology Severo Ochoa (CSIC-UAM), University Autonomous from Madrid, C/ Nicolás Cabrera, 1, Cantoblanco, 28049, Madrid, Spain.,Crown Bioscience, Taicang, China.,Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.,Applied Biotechnology Group, Biomedical Science School, Universidad Europea de Madrid, Urbanización El Bosque, Calle Tajo, s/n, 28670, Villaviciosa de Odón, Spain; Grupo de Investigación en Desarrollo Agroindustrial Sostenible, Universidad de la Costa, CUC, Calle 58 # 55 - 66, Barranquilla, Colombia. Electronic address: jesus.fernandez2@universidadeuropea.es.,Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.,Department of Bioengineering and James H. Clark Center, Stanford University, Stanford, CA 94305, USA; Biosciences Division, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA.,MRC Laboratory of Molecular Biology, Cambridge, UK.,Department of Chemistry, University of Washington, Seattle, WA, USA.,School of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Republic of Korea; Steitz Center for Structural Biology, Gwangju Institute of Science and Technology, Gwangju, 61005, Republic of Korea; Department of Chemistry, Gwangju Institute of Science and Technology, Gwangju, 61005, Republic of Korea. Electronic address: eom@gist.ac.kr.,Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8601, Japan.,Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA. dabaker@uw.edu.,Department of Chemistry, Molecular Sciences Research Hub, Imperial College London, Wood Lane, London W12 0BZ, England.,Department of Applied Chemistry, Waseda University, Tokyo 169-8555, Japan.,Department of Microbiology, New York University School of Medicine, New York, NY, 10016, USA.,Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX, USA. Xuewu.Zhang@UTSouthwestern.edu.,Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA.,MRC Laboratory of Molecular Biology, Cambridge, UK. scheres@mrc-lmb.cam.ac.uk.,Materials Science and Engineering, University of California, San Diego, La Jolla, CA, USA. tezcan@ucsd.edu.,Division of Basic Science, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.,Graduate Program in Quantitative and Computational Biosciences, Baylor College of Medicine, Houston, TX 77030, USA; Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.,Department of Biochemistry and Molecular Biology, SUNY Upstate Medical University, Syracuse, NY 13210, USA. Electronic address: wilkenss@upstate.edu.,ERATO Itami Molecular Nanocarbon Project, JST, Nagoya 464-8601, Japan.,College of Veterinary Medicine, Kansas State University, Manhattan, KS, 66506, USA.,Molecular Biophysics and Integrated Bioimaging, Berkeley Center for Structural Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.,Department of Pharmacy, University of Patras, GR-26504 Patras, Greece.,Department of Dermatology, Yale University, New Haven, CT, USA.,Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA, USA.,Department of Biophysics, All India Institute of Medical Sciences, Ansari Nagar, New Delhi 110 029, India.,The Department of Chemistry and Biochemistry, Auburn University, Auburn, Alabama, 36849.,UVE: Aix-Marseille Univ-IRD 190-Inserm 27-IHU Méditerranée Infection, Marseille, France. Electronic address: Bruno.Coutard@univ-amu.fr.,Molecular Biophysics and Integrated Bioimaging, Berkeley Center for Structural Biology, Lawrence Berkeley National Laboratory, Berkeley, California, USA.,Department of Health Sciences, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.,Department of Chemistry and Biochemistry and the UCLA-DOE Institute of Genomics and Proteomics, University of California, Los Angeles, California, USA.,National Research Laboratory of Molecular Microbiology and Toxicology, Department of Agricultural Biotechnology and Center for Food Safety and Toxicology, Seoul National University, Seoul, 08826, South Korea. choish@snu.ac.kr.,Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX, USA.,Department of Physics, Graduate School of Science, Nagoya University, Nagoya 464-8601, Japan, and RIKEN Center for Computational Science, Kobe 650-0047, Japan.,AFMB, UMR7257 CNRS/Aix Marseille Université, Marseille, CEDEX 9, France.,Institute of Physiology II, Faculty of Medicine, University of Freiburg, D-79104 Freiburg, Germany.,Vollum Institute, Oregon Health & Science University, Portland, United States.,Department of Microbiology, Yonsei University College of Medicine, 50-1 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.,Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autònoma de Barcelona, E-08193 Cerdanyola del Vallès, Spain.,Department of Molecular and Cell Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, Berkeley, CA 94720, USA. eunyong_park@berkeley.edu.,Department of Biochemistry, University of Saskatchewan, Saskatoon, Canada.,Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, China. shi-lab@tsinghua.edu.cn.,Biophysics Graduate Program, University of California, Berkeley, Berkeley, CA 94720, USA.,Division for Structural Biochemistry, OE8830, Hannover Medical School, Hannover, Germany.,Laboratory of Molecular Physiology, NHLBI, National Institutes of Health, Bethesda, United States.,Graduate School of Science, Osaka Prefecture University, Osaka 599-8531, Japan.,Department of Physics, University of California, San Diego, La Jolla, CA, USA.,Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture, College of Life Sciences, Department of Microbiology, Nanjing Agricultural University, Nanjing, 210095, China.,Center for Drug Discovery, Northeastern University, Boston, MA 02115, USA.,Division of Oral Biology and Medicine, School of Dentistry, University of California, Los Angeles, California, USA.,Division of Basic Sciences, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N., Seattle, WA 98109, USA.,School of Pharmacy , University of Waterloo , Waterloo , Ontario , Canada N2L 3G1.,Institute of Biotechnology, Vilnius University, Vilnius, Lithuania. Electronic address: siksnys@ibt.lt.,Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA 02115, USA. Electronic address: c.mattos@northeastern.edu.,Fundación ARAID, 50018, Zaragoza, Spain. rhurtado@bifi.es.,Department of Bioengineering and James H. Clark Center, Stanford University, Stanford, CA 94305, USA; Biosciences Division, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA; Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: wahc@stanford.edu.,Centre for Structural Systems Biology (CSSB), German Electron Synchrotron (DESY), Hamburg, Germany.,Department of Crystallography and Structural Biology, Institute of Physical Chemistry Rocasolano (CSIC), C/ Serrano, 119, 28006, Madrid, Spain.,Center for RNA Research, Institute for Basic Science, Seoul National University, Seoul, 08826, South Korea.,Department of Biochemistry, University of Washington, Seattle, WA, USA. dabaker@uw.edu.,Section of Structural Biology, Department of Medicine, Imperial College London, London SW7 2AZ, UK.,National Research Laboratory of Molecular Microbiology and Toxicology, Department of Agricultural Biotechnology and Center for Food Safety and Toxicology, Seoul National University, Seoul, 08826, South Korea.,Institute for Advanced Study , The Hong Kong University of Science and Technology , Clear Water Bay , Kowloon , Hong Kong SAR , China.,Department of Food Science and Engineering, Ewha Womans University, Seoul, 03760, South Korea.,Structural Biology Laboratory, Department of Chemistry, University of York, York YO10 5DD, England.,Research Institute for Agriculture and Life Sciences, Center for Food and Bioconvergence, Center for Food Safety and Toxicology, Seoul National University, Seoul 08826, Korea.,Institute for Protein Design, University of Washington, Seattle, WA, USA.,Department of Microbiology, Yonsei University College of Medicine, 50-1 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea. jsshin6203@yuhs.ac.,Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA. Zhijian.Chen@UTSouthwestern.edu.,Future Medicine Co., Ltd, Seoul, 06665, South Korea.,Howard Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, TX, USA. Zhijian.Chen@UTSouthwestern.edu.,Department of Chemistry and Biochemistry and the UCLA-DOE Institute of Genomics and Proteomics, University of California, Los Angeles, California, USA rclubb@mbi.ucla.edu htonthat@dentistry.ucla.edu.,Faculty of Natural Sciences, Department of Life Sciences, Imperial College London, Exhibition Road, South Kensington, London SW7 2AZ, England.,Institute for Biophysical Chemistry, OE4350, Hannover Medical School, Hannover, Germany.,Institute for Protein Design, University of Washington, Seattle, WA, USA. dabaker@uw.edu.,Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX, USA. Xiaochen.Bai@UTSouthwestern.edu.,National Research Laboratory of Molecular Microbiology and Toxicology, Seoul National University, Seoul 08826, Korea.,Institute of Biotechnology, Vilnius University, Vilnius, Lithuania.,Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autònoma de Barcelona, E-08193 Cerdanyola del Vallès, Spain. Electronic address: Ester.Boix@uab.cat.,Department of Physiology, Faculty of Medicine, Saitama Medical University, Saitama 350-0495, Japan.,Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA 02115, USA.,1MOE Key Laboratory of Protein Sciences, Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences and School of Medicine, Tsinghua University, Beijing, 100084 China.,Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA, USA. tezcan@ucsd.edu.,John Harvard Distinguished Science Fellowship Program, Harvard University, Cambridge, MA, USA.,Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA. Xiaochen.Bai@UTSouthwestern.edu.,Department of Chemistry , University of Waterloo , Waterloo , Ontario , Canada N2L 3G1.,MRC Laboratory of Molecular Biology, Cambridge, UK. mg@mrc-lmb.cam.ac.uk.,Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, 200011, Shanghai, China. huangchh@shsmu.edu.cn.,Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.,Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX, USA. Xuewu.Zhang@UTSouthwestern.edu.,Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autònoma de Barcelona, E-08193 Cerdanyola del Vallès, Spain. Electronic address: Victoria.Nogues@uab.cat.,Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, 200011, Shanghai, China.,Department of Physiology and Advanced Research Center for Medical Science, Toho University School of Medicine, Tokyo 143-8540, Japan.,Center for Advanced Medical Innovation, Kyushu University, Fukuoka 812-8582, Japan.,Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.,Center for Integrated Protein Science Munich at the Department Chemie, Lehrstuhl für Biochemie, Technische Universität München, Garching, Germany.,Department of Immunology, The University of Texas Southwestern Medical Center, 6000 Harry Hines Blvd., Dallas, TX, 75390, USA.,Shanghai Institute of Precision Medicine, 200125, Shanghai, China.,School of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 61005, Republic of Korea; Steitz Center for Structural Biology, Gwangju Institute of Science and Technology, Gwangju, 61005, Republic of Korea.,State Key Laboratory of Microbial Technology, Shandong University, Jinan, China.,Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, University of Fukui, Fukui-shi, Japan.,Chemistry Department, McGill University, Montreal, Quebec, H3A0B8, Canada.,Center for Integrated Protein Science Munich at the Department Chemie, Lehrstuhl für Biochemie, Technische Universität München, Garching, Germany. Electronic address: michael.groll@tum.de.,Technology Center for Protein Sciences, Ministry of Education Key Laboratory of Protein Sciences, School of Life Sciences, Tsinghua University, Beijing, China.,Shanghai Institute of Precision Medicine, 200125, Shanghai, China. leim@shsmu.edu.cn.,BIFI, University of Zaragoza, BIFI-IQFR (CSIC) Joint Unit, Mariano Esquillor s/n, Campus Rio Ebro, Edificio I+D, Zaragoza, 50018, Spain.,BIFI, University of Zaragoza, BIFI-IQFR (CSIC) Joint Unit, Mariano Esquillor s/n, Campus Rio Ebro, Edificio I+D, Zaragoza, 50018, Spain. rhurtado@bifi.es.,Department of Technical Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Allmandring 31, Stuttgart, Germany.,Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, 200011, Shanghai, China. leim@shsmu.edu.cn.,Applied Biotechnology Group, Biomedical Science School, Universidad Europea de Madrid, Urbanización El Bosque, Calle Tajo, s/n, 28670, Villaviciosa de Odón, Spain.,Department of Veterinary Physiology, College of Veterinary Medicine, Research Institute for Veterinary Science, and BK21 PLUS Program for Creative Veterinary Science Research, Seoul National University, Seoul, 08826, South Korea.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ferritin heavy chain
A
182Homo sapiensMutation(s): 0 
Gene Names: FTH1 (FTH, FTHL6)
EC: 1.16.3.1
Find proteins for P02794 (Homo sapiens)
Go to Gene View: FTH1
Go to UniProtKB:  P02794
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
FE
Query on FE

Download SDF File 
Download CCD File 
A
FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.06 Å
  • R-Value Free: 0.103 
  • R-Value Work: 0.091 
  • Space Group: F 4 3 2
Unit Cell:
Length (Å)Angle (°)
a = 180.040α = 90.00
b = 180.040β = 90.00
c = 180.040γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
iMOSFLMdata reduction
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-05-02
    Type: Initial release
  • Version 1.1: 2018-05-16
    Type: Data collection, Database references