6B1Q

Hydrogen Bonding Complementary, not size complementarity is key in the formation of the double helix


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

"Skinny" and "Fat" DNA: Two New Double Helices.

Hoshika, S.Singh, I.Switzer, C.Molt Jr., R.W.Leal, N.A.Kim, M.J.Kim, M.S.Kim, H.J.Georgiadis, M.M.Benner, S.A.

(2018) J. Am. Chem. Soc. 140: 11655-11660


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Reverse transcriptase
A
259Moloney murine leukemia virusMutation(s): 0 
Gene Names: gag-pol
Find proteins for P03355 (Moloney murine leukemia virus)
Go to UniProtKB:  P03355
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(*CP*TP*TP*AP*TP*(CJ1)P*(CJ1)P*(CJ1))-3')B8Escherichia coli
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(P*(1AP)P*(1AP)P*(1AP)P*AP*TP*AP*AP*G)-3')G8Escherichia coli
Small Molecules
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
1AP
Query on 1AP
G
DNA LINKINGC10 H15 N6 O6 PDA
CJ1
Query on CJ1
B
DNA linkingC11 H14 N3 O8 P

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.204 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 55.278α = 90.00
b = 146.282β = 90.00
c = 46.941γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
MOLREPphasing
PHENIXrefinement
SCALAdata scaling
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-09-19
    Type: Initial release
  • Version 1.1: 2018-09-26
    Type: Data collection, Database references
  • Version 1.2: 2018-10-03
    Type: Data collection, Database references