6AUK

Crystal structure of rotavirus Non Structural protein 2 (NSP2) mutant S313D


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.603 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.

Criglar, J.M.Anish, R.Hu, L.Crawford, S.E.Sankaran, B.Prasad, B.V.V.Estes, M.K.

(2018) Proc. Natl. Acad. Sci. U.S.A. 115: E12015-E12023


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Non-structural protein 2
A
317Rotavirus A (isolate RVA/Monkey/South Africa/SA11-H96/1958/G3P5B[2])Mutation(s): 1 
EC: 3.6.4.-
Find proteins for A2T3P0 (Rotavirus A (isolate RVA/Monkey/South Africa/SA11-H96/1958/G3P5B[2]))
Go to UniProtKB:  A2T3P0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.603 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.206 
  • Space Group: I 4 2 2
Unit Cell:
Length (Å)Angle (°)
a = 107.926α = 90.00
b = 107.926β = 90.00
c = 152.487γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
PHENIXrefinement
PHASERphasing
SCALEPACKdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2017-09-01 
  • Released Date: 2018-12-05 
  • Deposition Author(s): Hu, L., Prasad, B.V.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesR37 AI 36040
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesR01 AI080656
Welch FoundationUnited StatesQ1279

Revision History 

  • Version 1.0: 2018-12-05
    Type: Initial release
  • Version 1.1: 2018-12-19
    Type: Data collection, Database references
  • Version 1.2: 2019-01-02
    Type: Data collection, Database references
  • Version 1.3: 2019-02-20
    Type: Author supporting evidence, Data collection