6AU2

Crystal structure of SETDB1 Tudor domain with aryl triazole fragments


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.189 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of SETDB1 Tudor domain with aryl triazole fragments

WU, H.DONG, A.ZENG, H.ELBAKKOURI, M.BARSYTE, D.VEDADI, M.TATLOCK, J.OWEN, D.BUNNAGE, M.Bountra, C.Arrowsmith, C.H.Edwards, A.M.BROWN, P.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Histone-lysine N-methyltransferase SETDB1
A
213Homo sapiensMutation(s): 0 
Gene Names: SETDB1 (KIAA0067, KMT1E)
EC: 2.1.1.43
Find proteins for Q15047 (Homo sapiens)
Go to Gene View: SETDB1
Go to UniProtKB:  Q15047
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

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A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
UNX
Query on UNX

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A
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
EDO
Query on EDO

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A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
BME
Query on BME

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A
BETA-MERCAPTOETHANOL
C2 H6 O S
DGVVWUTYPXICAM-UHFFFAOYSA-N
 Ligand Interaction
CGJ
Query on CGJ

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A
1-methyl-4H,6H-[1,2,4]triazolo[4,3-a][4,1]benzoxazepine
C11 H11 N3 O
HEEIZXCFEVISIX-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.189 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 55.202α = 90.00
b = 63.273β = 90.00
c = 69.859γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
REFMACrefinement
Cootmodel building
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2017-10-11
    Type: Initial release