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Download EndnoteStructure of Cetuximab Fab mutant in complex with EGFR extracellular domain
Christie, M., Christ, D.To be published.
6ARU
Structure of Cetuximab Fab mutant in complex with EGFR extracellular domain
- DOI: 10.2210/pdb6ARU/pdb
- Classification: TRANSFERASE/IMMUNE SYSTEM
- Organism(s): Homo sapiens
- Expression System: Homo sapiens
- Deposited: 2017-08-23 Released: 2018-08-29
- Funding Organization(s): Australian Research Council
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.2 Å
- R-Value Free: 0.267
- R-Value Work: 0.232
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Epidermal growth factor receptor | A | 622 | Homo sapiens | Mutation(s): 0 Gene Names: EGFR (ERBB, ERBB1, HER1) EC: 2.7.10.1 |
Find proteins for P00533 (Homo sapiens) Go to Gene View: EGFR Go to UniProtKB: P00533 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Cetuximab mutant light chain,Uncharacterized protein | B | 214 | N/A | Mutation(s): 0 |
| Protein Feature View is not available: No corresponding UniProt sequence found. | ||||
Entity ID: 3 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Cetuximab mutant heavy chain Fab fragment,Immunoglobulin gamma-1 heavy chain | C | 222 | N/A | Mutation(s): 0 |
| Protein Feature View is not available: No corresponding UniProt sequence found. | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MAN Query on MAN | A | ALPHA-D-MANNOSE C6 H12 O6 WQZGKKKJIJFFOK-PQMKYFCFSA-N |  | Ligand Interaction | |
| BMA Query on BMA | A | BETA-D-MANNOSE C6 H12 O6 WQZGKKKJIJFFOK-RWOPYEJCSA-N |  | Ligand Interaction | |
| NAG Query on NAG | A, C | N-ACETYL-D-GLUCOSAMINE C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.2 Å
- R-Value Free: 0.267
- R-Value Work: 0.232
- Space Group: P 1 21 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 77.495 | α = 90.00 |
| b = 70.444 | β = 100.95 |
| c = 149.079 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| PHENIX | refinement |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Deposited Date: 2017-08-23
- Released Date: 2018-08-29
- Deposition Author(s): Christie, M., Christ, D.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Australian Research Council | Australia | DE160100608 |
| Australian Research Council | Australia | DP160104915 |
