Structure of Cetuximab Fab mutant in complex with EGFR extracellular domain
Christie, M., Christ, D.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Epidermal growth factor receptor | A | 622 | Homo sapiens | Mutation(s): 0  Gene Names: EGFR, ERBB, ERBB1, HER1 EC: 2.7.10.1 | ![]() |
Find proteins for P00533 (Homo sapiens) Explore P00533  Go to UniProtKB:  P00533 | |||||
NIH Common Fund Data Resources | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cetuximab mutant light chain,Uncharacterized protein | B | 214 | Homo sapiens | Mutation(s): 0  | ![]() |
Find proteins for Q8TCD0 (Homo sapiens) Explore Q8TCD0  Go to UniProtKB:  Q8TCD0 | |||||
Protein Feature ViewExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cetuximab mutant heavy chain Fab fragment,Immunoglobulin gamma-1 heavy chain | C | 222 | Homo sapiens | Mutation(s): 0  | ![]() |
Find proteins for P0DOX5 (Homo sapiens) Explore P0DOX5  Go to UniProtKB:  P0DOX5 | |||||
Protein Feature ViewExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Chain Length | 2D Diagram | Glycosylation | 3D Interactions |
alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | D | 8 | | N-Glycosylation | Oligosaccharides Interaction |
Entity ID: 5 | |||||
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Molecule | Chains | Chain Length | 2D Diagram | Glycosylation | 3D Interactions |
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | E | 2 | | N-Glycosylation | Oligosaccharides Interaction |
Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | A, C | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | Ligand Interaction |
Length ( Å ) | Angle ( ˚ ) |
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a = 77.495 | α = 90 |
b = 70.444 | β = 100.95 |
c = 149.079 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Australian Research Council (ARC) | Australia | DE160100608 |
Australian Research Council (ARC) | Australia | DP160104915 |