6AL9

Crystal structure of chorismate mutase from Helicobacter pylori in complex with prephenate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of chorismate mutase from Helicobacter pylori in complex with prephenate

Fan, Y.Jameson, G.B.Panjikar, S.Parker, E.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Chorismate mutase
A, B
96Helicobacter pylori (strain ATCC 700392 / 26695)Mutation(s): 0 
Find proteins for O25064 (Helicobacter pylori (strain ATCC 700392 / 26695))
Go to UniProtKB:  O25064
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PYR
Query on PYR

Download SDF File 
Download CCD File 
A
PYRUVIC ACID
C3 H4 O3
LCTONWCANYUPML-UHFFFAOYSA-N
 Ligand Interaction
PHB
Query on PHB

Download SDF File 
Download CCD File 
B
P-HYDROXYBENZOIC ACID
C7 H6 O3
FJKROLUGYXJWQN-UHFFFAOYSA-N
 Ligand Interaction
PRE
Query on PRE

Download SDF File 
Download CCD File 
A
PREPHENIC ACID
C10 H10 O6
FPWMCUPFBRFMLH-XGAOUMNUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.206 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 38.869α = 90.00
b = 63.526β = 90.00
c = 166.918γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
Aimlessdata scaling
REFMACrefinement
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
MarsdenNew ZealandUOC1105

Revision History 

  • Version 1.0: 2018-11-07
    Type: Initial release