6A09

Salmonella Typhi YfdX in the P222 space group


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.293 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.180 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural and Physiological Exploration ofSalmonellaTyphi YfdX Uncovers Its Dual Function in Bacterial Antibiotic Stress and Virulence.

Lee, H.S.Lee, S.Kim, J.S.Lee, H.R.Shin, H.C.Lee, M.S.Jin, K.S.Kim, C.H.Ku, B.Ryu, C.M.Kim, S.J.

(2018) Front Microbiol 9: 3329-3329


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
YfdX protein
A, B, C, D, E, F, G, H
185Salmonella enterica IMutation(s): 0 
Gene Names: yfdX (SBOV30831)
Find proteins for A0A0F7DJF1 (Salmonella enterica I)
Go to UniProtKB:  A0A0F7DJF1
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.293 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.180 
  • Space Group: P 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 72.395α = 90.00
b = 127.071β = 90.00
c = 170.384γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-02-06
    Type: Initial release
  • Version 1.1: 2019-02-13
    Type: Data collection, Database references