5ZFP

Structure of the ExbB/ExbD hexameric complex

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.84 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.245 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history. 

Literature

Hexameric and pentameric complexes of the ExbBD energizer in the Ton system.

Maki-Yonekura, S., Matsuoka, R., Yamashita, Y., Shimizu, H., Tanaka, M., Iwabuki, F., Yonekura, K.

(2018) Elife 7: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Biopolymer transport protein ExbB
A, B, C, D, E, F, G, H, I, J, K, L
244Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: exbB
Find proteins for P0ABU7 (Escherichia coli (strain K12))
Go to UniProtKB:  P0ABU7
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.84 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.245 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 121.470α = 90.00
b = 106.340β = 111.75
c = 163.360γ = 90.00
Software Package:
Software NamePurpose
BUSTERrefinement
PHASERphasing
XDSdata reduction
XDSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots


View more in-depth experimental data

Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
the Japan Society for the Promotion of Science Grant-in-Aid for Scientific Research GrantJapan15K06986
the Japan Society for the Promotion of Science Grant-in-Aid for Scientific Research GrantJapan16H04757

Revision History 

  • Version 1.0: 2018-05-09
    Type: Initial release