Crystal structures of unlinked full length NS3 from Dengue virus provide insights into dynamics of protease domain
Phoo, W.W., El Sahili, A., ZHANG, Z.Z., CHEN, M.W., VASUDEVAN, S., LESCAR, J., LUO, D.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Genome polyprotein | A [auth B] | 627 | dengue virus type 4 | Mutation(s): 1  | ![]() |
UniProt | |||||
Find proteins for F8TEL4 (dengue virus type 4) Explore F8TEL4  Go to UniProtKB:  F8TEL4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F8TEL4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Genome polyprotein | B [auth A] | 55 | dengue virus type 4 | Mutation(s): 0  | ![]() |
UniProt | |||||
Find proteins for F8TEL4 (dengue virus type 4) Explore F8TEL4  Go to UniProtKB:  F8TEL4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F8TEL4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Pancreatic trypsin inhibitor | C [auth I] | 55 | Bos taurus | Mutation(s): 0  | ![]() |
UniProt | |||||
Find proteins for P00974 (Bos taurus) Explore P00974  Go to UniProtKB:  P00974 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00974 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | D [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 53.059 | α = 90 |
b = 85.627 | β = 97.95 |
c = 85.508 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
iMOSFLM | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
NTU | Singapore | STARTUP_GRANT |
NMRC | Singapore | CBRG14051 |
NMRC | Singapore | CBRG/0103/2016 |
NRF | Singapore | NRF-CRP001-063 |