5YC9

Crystal structure of a Pseudomonas aeruginosa transcriptional regulator

• PDB DOI: https://doi.org/10.2210/pdb5YC9/pdb

• Classification: TRANSCRIPTION
• Organism(s): Pseudomonas aeruginosa
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2017-09-07 Released: 2019-03-20 
• Deposition Author(s): Harikiran, R., Rohan, S.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.90 Å
• R-Value Free: 0.307 
• R-Value Work: 0.268 
• R-Value Observed: 0.272 

Literature

Crystal structure of a Pseudomonas aeruginosa transcriptional regulator

Harikiran, R., Sundararajan, R., Sharma, R.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 133.76 kDa 
• Atom Count: 8,286 
• Modelled Residue Count: 1,006 
• Deposited Residue Count: 1,164 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
C-di-GMP-binding multidrug transporter transcriptional regulator BrlR	A, B, C, D	291	Pseudomonas aeruginosa	Mutation(s): 0  Gene Names: bmrR, brlR, AO964_25340, AOY09_00728, CAZ10_02115, CGU42_14110, CWI21_27955, PAERUG_E15_London_28_01_14_00871, RW109_RW109_06470
UniProt
Find proteins for Q9HUT5 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HUT5  Go to UniProtKB:  Q9HUT5

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.90 Å
• R-Value Free: 0.307 
• R-Value Work: 0.268 
• R-Value Observed: 0.272 
• Space Group: P 6₅

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 111.642	α = 90
b = 111.642	β = 90
c = 261.137	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2019-03-20 
Deposition Author(s): Harikiran, R., Rohan, S.

Revision History  

• Version 1.0: 2019-03-20
  Type: Initial release
  
• Version 1.1: 2024-03-27
  Changes: Data collection, Database references