Download MendeleyCrystal Structure Basis for PEDV nsp1
Shen, Z., Peng, G.Q.To be published.
5XBC
Crystal Structure Basis for PEDV nsp1
- PDB DOI: https://doi.org/10.2210/pdb5XBC/pdb
- Classification: HYDROLASE
- Organism(s): Porcine epidemic diarrhea virus
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2017-03-16 Released: 2017-12-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.193
- R-Value Work: 0.171
- R-Value Observed: 0.172
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| nsp1 protein | 118 | Porcine epidemic diarrhea virus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for K4L9I6 (Porcine epidemic diarrhea virus) Explore K4L9I6 Go to UniProtKB: K4L9I6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | K4L9I6 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.193
- R-Value Work: 0.171
- R-Value Observed: 0.172
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 34.709 | α = 90 |
| b = 75.053 | β = 89.96 |
| c = 37.363 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data scaling |
| PDB_EXTRACT | data extraction |
| HKL | data scaling |
Entry History
Deposition Data
- Released Date: 2017-12-13 Deposition Author(s): Shen, Z., Peng, G.Q.
Revision History (Full details and data files)
- Version 1.0: 2017-12-13
Type: Initial release - Version 1.1: 2024-03-27
Changes: Data collection, Database references
