5UHM

Apo-Structure of Mature Growth Differentiation Factor 11


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.217 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural basis for potency differences between GDF8 and GDF11.

Walker, R.G.Czepnik, M.Goebel, E.J.McCoy, J.C.Vujic, A.Cho, M.Oh, J.Aykul, S.Walton, K.L.Schang, G.Bernard, D.J.Hinck, A.P.Harrison, C.A.Martinez-Hackert, E.Wagers, A.J.Lee, R.T.Thompson, T.B.

(2017) BMC Biol. 15: 19-19

  • DOI: 10.1186/s12915-017-0350-1
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Growth/differentiation factor 8 (GDF8) and GDF11 are two highly similar members of the transforming growth factor β (TGFβ) family. While GDF8 has been recognized as a negative regulator of muscle growth and differentiation, there are conflicting stud ...

    Growth/differentiation factor 8 (GDF8) and GDF11 are two highly similar members of the transforming growth factor β (TGFβ) family. While GDF8 has been recognized as a negative regulator of muscle growth and differentiation, there are conflicting studies on the function of GDF11 and whether GDF11 has beneficial effects on age-related dysfunction. To address whether GDF8 and GDF11 are functionally identical, we compared their signaling and structural properties.


    Organizational Affiliation

    Department of Molecular Genetics, Biochemistry, and Microbiology, University of Cincinnati, Cincinnati, OH, 45267, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Growth/differentiation factor 11
A, B
109Homo sapiensMutation(s): 0 
Gene Names: GDF11 (BMP11)
Find proteins for O95390 (Homo sapiens)
Go to Gene View: GDF11
Go to UniProtKB:  O95390
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.217 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 65.160α = 90.00
b = 65.160β = 90.00
c = 101.942γ = 120.00
Software Package:
Software NamePurpose
iMOSFLMdata reduction
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-03-22
    Type: Initial release