5KX4

Structure of SALO


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.189 
  • R-Value Work: 0.165 
  • R-Value Observed: 0.167 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structure of SALO, a leishmaniasis vaccine candidate from the sand fly Lutzomyia longipalpis.

Asojo, O.A.Kelleher, A.Liu, Z.Pollet, J.Hudspeth, E.M.Rezende, W.C.Groen, M.J.Seid, C.A.Abdeladhim, M.Townsend, S.de Castro, W.Mendes-Sousa, A.Bartholomeu, D.C.Fujiwara, R.T.Bottazzi, M.E.Hotez, P.J.Zhan, B.Oliveira, F.Kamhawi, S.Valenzuela, J.G.

(2017) PLoS Negl Trop Dis 11: e0005374-e0005374

  • DOI: https://doi.org/10.1371/journal.pntd.0005374
  • Primary Citation of Related Structures:  
    5KX4

  • PubMed Abstract: 

    Immunity to the sand fly salivary protein SALO (Salivary Anticomplement of Lutzomyia longipalpis) protected hamsters against Leishmania infantum and L. braziliensis infection and, more recently, a vaccine combination of a genetically modified Leishmania with SALO conferred strong protection against L. donovani infection. Because of the importance of SALO as a potential component of a leishmaniasis vaccine, a plan to produce this recombinant protein for future scale manufacturing as well as knowledge of its structural characteristics are needed to move SALO forward for the clinical path.


  • Organizational Affiliation

    Sabin Vaccine Institute and Texas Children's Hospital Center for Vaccine Development, National School of Tropical Medicine, Baylor College of Medicine, Houston, Texas, United States of America.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
10.7 kDa salivary protein
A, B
101Lutzomyia longipalpisMutation(s): 0 
UniProt
Find proteins for Q5WPZ4 (Lutzomyia longipalpis)
Explore Q5WPZ4 
Go to UniProtKB:  Q5WPZ4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5WPZ4
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.189 
  • R-Value Work: 0.165 
  • R-Value Observed: 0.167 
  • Space Group: P 42
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 65.28α = 90
b = 65.28β = 90
c = 39.31γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
iMOSFLMdata reduction
SCALAdata scaling
SHELXEmodel building

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Released Date: 2016-07-27 
  • Deposition Author(s): Asojo, O.A.
  • This entry supersedes: 4LU2

Revision History  (Full details and data files)

  • Version 1.0: 2016-07-27
    Type: Initial release
  • Version 1.1: 2016-08-10
    Changes: Database references, Structure summary
  • Version 1.2: 2017-07-05
    Changes: Database references
  • Version 1.3: 2017-11-22
    Changes: Refinement description