5ZY6

catechol methyltransferase spCOMT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.188 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

structural insight into spCOMT

Wang, Q.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Probable catechol O-methyltransferase 1A, B274Schizosaccharomyces pombe 972h-Mutation(s): 0 
Gene Names: SPBC119.03
EC: 2.1.1.6
UniProt
Find proteins for O42898 (Schizosaccharomyces pombe (strain 972 / ATCC 24843))
Explore O42898 
Go to UniProtKB:  O42898
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SAM (Subject of Investigation/LOI)
Query on SAM

Download Ideal Coordinates CCD File 
C [auth A], D [auth B]S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.188 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 71.265α = 90
b = 78.858β = 90
c = 102.781γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment  



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2018-05-22 
  • Released Date: 2019-05-22 
  • Deposition Author(s): Wang, Q., Xu, L.

Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChinaU1732114, 31770788, 31770895

Revision History  (Full details and data files)

  • Version 1.0: 2019-05-22
    Type: Initial release