5ZT9

SirB from Bacillus subtilis with Ni2+


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.214 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

A route for metal acquisition for chelatase reaction catalyzed by SirB from Bacillus subtilis

Fujishiro, T.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Sirohydrochlorin ferrochelataseA, B273Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: sirBylnEBSU15620
EC: 4.99.1.4
UniProt
Find proteins for O34632 (Bacillus subtilis (strain 168))
Explore O34632 
Go to UniProtKB:  O34632
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.214 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 69.73α = 90
b = 53.7β = 107.66
c = 78.02γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XSCALEdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
MOLREPphasing

Structure Validation

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Entry History & Funding Information

Deposition Data

  • Deposited Date: 2018-05-02 
  • Released Date: 2019-06-12 
  • Deposition Author(s): Fujishiro, T.

Funding OrganizationLocationGrant Number
Japan Society for the Promotion of ScienceJapan17K14510

Revision History  (Full details and data files)

  • Version 1.0: 2019-06-12
    Type: Initial release