5ZOA

The crystal structure of a Thermobifida fusca cutinase

PDB DOI: https://doi.org/10.2210/pdb5ZOA/pdb

Classification: HYDROLASE
Organism(s): Thermobifida fusca
Expression System: Escherichia coli K-12
Mutation(s): No

Deposited: 2018-04-12 Released: 2019-04-17
Deposition Author(s): Dong, Q.L., Wu, L., Wu, J., Zhou, J.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.54 Å
R-Value Free: 0.180
R-Value Work: 0.166
R-Value Observed: 0.166

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The crystal structure of a cutinase from Thermobifida fusca

Dong, Q.L., Wu, L., Wu, J., Zhou, J.H.

To be published.

Macromolecule Content

Total Structure Weight: 28.27 kDa
Atom Count: 2,172
Modelled Residue Count: 261
Deposited Residue Count: 261
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
BTA-hydrolase 1	A	261	Thermobifida fusca	Mutation(s): 0 Gene Names: bta1, cut_2 EC: 3.1.1.74
UniProt
Find proteins for Q6A0I4 (Thermobifida fusca) Explore Q6A0I4 Go to UniProtKB: Q6A0I4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6A0I4
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CL Query on CL Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain B [auth A] MOL2 format, chain C [auth A] MOL2 format, chain B [auth A]	B [auth A], C [auth A]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M		Interactions Focus chain B [auth A] Focus chain C [auth A] Interactions & Density Focus chain B [auth A] Focus chain C [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.54 Å
R-Value Free: 0.180
R-Value Work: 0.166
R-Value Observed: 0.166
Space Group: P 4 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 86.298	α = 90
b = 86.298	β = 90
c = 76.117	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2019-04-17

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2019-04-17
Type: Initial release
Version 1.1: 2024-03-27
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.