5ZNT

Insect chitin deacetylase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.979 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.167 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural and biochemical insights into the catalytic mechanisms of two insect chitin deacetylases of the carbohydrate esterase 4 family.

Liu, L.Zhou, Y.Qu, M.Qiu, Y.Guo, X.Zhang, Y.Liu, T.Yang, J.Yang, Q.

(2019) J. Biol. Chem. 294: 5774-5783


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
chitin deacetylase
A
385Bombyx moriMutation(s): 0 
Gene Names: 101740647
Find proteins for H9J9M0 (Bombyx mori)
Go to UniProtKB:  H9J9M0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
NAG
Query on NAG

Download SDF File 
Download CCD File 
A
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.979 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.167 
  • Space Group: I 4
Unit Cell:
Length (Å)Angle (°)
a = 136.006α = 90.00
b = 136.006β = 90.00
c = 77.209γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
HKL-2000data scaling
HKL-2000data reduction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina31772193

Revision History 

  • Version 1.0: 2019-02-20
    Type: Initial release
  • Version 1.1: 2019-03-20
    Type: Data collection, Database references
  • Version 1.2: 2019-04-24
    Type: Data collection, Database references