5ZC4

Crystal Structure of RNF13 RING domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.167 

wwPDB Validation 3D Report Full Report



Literature

Crystal Structure of RNF13 RING domain

Sarkar, S.Datta, A.B.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
E3 ubiquitin-protein ligase RNF13A, D76Homo sapiensMutation(s): 0 
Gene Names: RNF13RZF
EC: 2.3.2.27
Find proteins for O43567 (Homo sapiens)
Explore O43567 
Go to UniProtKB:  O43567
NIH Common Fund Data Resources
PHAROS  O43567
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download CCD File 
A, D
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.167 
  • Space Group: P 62
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 90.338α = 90
b = 90.338β = 90
c = 45.445γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
SHELXDphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustIndia500241/Z/11/Z

Revision History 

  • Version 1.0: 2019-02-27
    Type: Initial release