5ZA4

Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.193 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi.

Gangi Setty, T.Mowers, J.C.Hobbs, A.G.Maiya, S.P.Syed, S.Munson Jr., R.S.Apicella, M.A.Subramanian, R.

(2018) J. Biol. Chem. 293: 20073-20084


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative ABC transporter periplasmic binding protein
A
488Haemophilus ducreyi (strain 35000HP / ATCC 700724)Mutation(s): 0 
Find proteins for Q7VL18 (Haemophilus ducreyi (strain 35000HP / ATCC 700724))
Go to UniProtKB:  Q7VL18
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.193 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.203 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 43.934α = 90.00
b = 79.283β = 91.21
c = 68.412γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
PHASERphasing
d*TREKdata reduction
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Science and TechnologyIndiaSR/SO/BB-19/2010
Department of BiotechnologyIndiaBT/IN/Sweden/41/SR/2013

Revision History 

  • Version 1.0: 2018-10-24
    Type: Initial release
  • Version 1.1: 2019-01-16
    Type: Data collection, Database references