5Z97

Crystal structure of a lactonase double mutant in complex with ligand N


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.32 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.210 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of a Mycoestrogen-Detoxifying Lactonase from Rhinocladiella mackenziei: Molecular Insight into ZHD Substrate Selectivity

Zheng, Y.Y.Liu, W.T.Chen, C.C.Hu, X.Y.Liu, W.D.Ko, T.P.Tang, X.K.Wei, H.L.Huang, J.W.Guo, R.T.

(2018) Acs Catalysis 8: 4294-4298


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Lactonase for protein
A, B, C, D
263Rhinocladiella mackenziei CBS 650.93Mutation(s): 2 
Find proteins for A0A0D2ILK1 (Rhinocladiella mackenziei CBS 650.93)
Go to UniProtKB:  A0A0D2ILK1
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
ZER
Query on ZER

Download SDF File 
Download CCD File 
A, B, C
(3S,11E)-14,16-dihydroxy-3-methyl-3,4,5,6,9,10-hexahydro-1H-2-benzoxacyclotetradecine-1,7(8H)-dione
Zearalenone
C18 H22 O5
MBMQEIFVQACCCH-QBODLPLBSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.32 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.210 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 44.319α = 90.00
b = 110.520β = 99.93
c = 127.779γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data reduction
REFMACrefinement
HKL-2000data scaling
PDB_EXTRACTdata extraction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina31400678, 31470240, 31500642, 31570130, 31600058, and 31600638

Revision History 

  • Version 1.0: 2018-05-02
    Type: Initial release