Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide
Sugiura, H., Oiki, S., Mikami, B., Murata, K., Hashimoto, W.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative ABC transporter substrate-binding protein YesO | A | 427 | Bacillus subtilis subsp. subtilis str. 168 | Mutation(s): 0  Gene Names: yesO, BSU06970 | ![]() |
UniProt | |||||
Find proteins for O31518 (Bacillus subtilis (strain 168)) Explore O31518  Go to UniProtKB:  O31518 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O31518 | ||||
Protein Feature ViewExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Chain Length | 2D Diagram | Glycosylation | 3D Interactions |
2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-[beta-D-galactopyranose-(1-4)]alpha-L-rhamnopyranose | B | 3 | N/A | Oligosaccharides Interaction | |
Glycosylation Resources | |||||
GlyTouCan:  G48077ST GlyCosmos:  G48077ST |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 42.23 | α = 90 |
b = 78.592 | β = 102.04 |
c = 54.075 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Fuji Foundation for Protein Research | Japan | -- |