5Z3L

Structure of Snf2-nucleosome complex in apo state


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.31 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Mechanism of DNA translocation underlying chromatin remodelling by Snf2.

Li, M.Xia, X.Tian, Y.Jia, Q.Liu, X.Lu, Y.Li, M.Li, X.Chen, Z.

(2019) Nature 567: 409-413

  • DOI: 10.1038/s41586-019-1029-2
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Chromatin remodellers include diverse enzymes with distinct biological functions, but nucleosome-sliding activity appears to be a common theme <sup>1,2 </sup>. Among the remodelling enzymes, Snf2 serves as the prototype to study the action of this pr ...

    Chromatin remodellers include diverse enzymes with distinct biological functions, but nucleosome-sliding activity appears to be a common theme 1,2 . Among the remodelling enzymes, Snf2 serves as the prototype to study the action of this protein family. Snf2 and related enzymes share two conserved RecA-like lobes 3 , which by themselves are able to couple ATP hydrolysis to chromatin remodelling. The mechanism by which these enzymes couple ATP hydrolysis to translocate the nucleosome along the DNA remains unclear 2,4-8 . Here we report the structures of Saccharomyces cerevisiae Snf2 bound to the nucleosome in the presence of ADP and ADP-BeF x . Snf2 in the ADP-bound state adopts an open conformation similar to that in the apo state, and induces a one-base-pair DNA bulge at superhelix location 2 (SHL2), with the tracking strand showing greater distortion than the guide strand. The DNA distortion propagates to the proximal end, leading to staggered translocation of the two strands. The binding of ADP-BeF x triggers a closed conformation of the enzyme, resetting the nucleosome to a relaxed state. Snf2 shows altered interactions with the DNA in different nucleotide states, providing the structural basis for DNA translocation. Together, our findings suggest a fundamental mechanism for the DNA translocation that underlies chromatin remodelling.


    Organizational Affiliation

    College of Physics and Information Science, Synergetic Innovation Center for Quantum Effects and Applications, Hunan Normal University, Changsha, 410081, Hunan, China. xiangxi@ibp.ac.cn hrliu@hunnu.edu.cn xzzhang@ibp.ac.cn wangjz@nicpbp.org.cn raozh@tsinghua.edu.cn.,Bioinformatics Group, Department of Computer Science and Interdisciplinary Centre for Bioinformatics, Institute of Informatics, University of Leipzig, Härtelstrasse 16-18, 04107 Leipzig, Germany.,Department of Pharmaceutical Sciences, College of Pharmacy , University of Tennessee Health Science Center , Memphis , Tennessee 38163 , United States.,Department of Biochemistry, King Abdulaziz University, Jeddah, 21589, Saudi Arabia.,Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw 02-106, Poland; Faculty of Agriculture and Biology, Warsaw University of Life Sciences, Warsaw 02-776, Poland.,Departamento de Química, Universidad de La Rioja, Centro de Investigación en Síntesis Química, E-26006, Logroño, Spain.,MOE Key Laboratory of Protein Science, Tsinghua University, Beijing, China. zhucheng_chen@tsinghua.edu.cn.,Infection and Immunity Program, Department of Microbiology, Monash University, Clayton, 3800, Australia.,Cardiovascular Research Institute, University of California at San Francisco, San Francisco, CA, USA. lijunliuks@gmail.com.,Howard Hughes Medical Institute, and Departments of Molecular and Cellular Physiology, and Structural Biology, Program in Immunology, Stanford University School of Medicine, Stanford, California, USA.,Crystal and Structural Chemistry, Bijvoet Center for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.,College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China. Electronic address: zoutingting@mail.hzau.edu.cn.,Department of Pharmacy and Biotechnology, University of Bologna, Viale Giuseppe Fanin 40, 40127, Bologna, Italy.,NTU Institute of Structural Biology, Nanyang Technological University, Singapore, Singapore. sbhushan@ntu.edu.sg.,Cryo-EM Structural Biology Laboratory, Van Andel Research Institute, Grand Rapids, MI, 49503, United states.,Department of Toxicology and Military Pharmacy, Faculty of Military Health Sciences, Trebesska 1575, 500 01, Hradec Kralove, Czech Republic; Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.,Research Center Borstel , Leibniz Lung Center , Parkallee 22 , Borstel D-23845 , Germany.,Biostructural Mechanism Laboratory, RIKEN, SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.,Department of Physiology and Pharmacology, Oregon Health & Science University, Portland, OR 97210, United States.,Adimab LLC, Lebanon, NH, USA.,Department of Cell Biology, Tokushima University Graduate School of Medical Science, Tokushima, 770-8503, Japan.,Center for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan.,Present address: Department of Chemical, Biological and Environmental Engineering, Bioprocess Engineering and Applied Biocatalysis Group, Engineering School, Campus de la UAB, 08193, Bellaterra (Cerdanyola del Vallés), Barcelona, Spain.,Program in Chemical Biology, Oregon Health & Science University, Portland, OR 97210, USA; Department of Physiology and Pharmacology, Oregon Health & Science University, Portland, OR 97210, United States.,School of Biological Sciences, Nanyang Technological University, Singapore, Singapore. sbhushan@ntu.edu.sg.,National Institute of Mental Health, Topolova 748, 250 67, Klecany, Czech Republic; Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.,Department of Molecular Medicine, University of South Florida Morsani College of Medicine, 12901 Bruce B. Downs Blvd., Tampa, Florida 33612, United States.,Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland.,Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.,Key Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.,Pharmaceutical Frontier Research Laboratories, Central Pharmaceutical Research Institute, Japan Tobacco Inc., 1-13-2, Fukuura, Kanazawa-Ku, Yokohama, Kanagawa, 236-0004, Japan. masato.noguchi@jt.com.,Institut de Biologie Structurale (IBS), Univ. Grenoble Alpes, CEA, CNRS, 38044, Grenoble, France.,National Institute for Viral Disease Control and Prevention, China CDC, Beijing, China.,School of Life Sciences, Jawaharlal Nehru University, New Delhi, India. Electronic address: sgourinath@mail.jnu.ac.in.,Program in Chemical Biology, Oregon Health & Science University, Portland, OR 97210, USA; Department of Physiology and Pharmacology, Oregon Health & Science University, Portland, OR 97210, United States; European Molecular Biology Laboratory (EMBL), Cell Biology and Biophysics Unit, Meyerhofstrasse 1, 69117 Heidelberg, Germany.,Dipartimento di Scienze Chirurgiche, Università di Cagliari, Cagliari, 09100, Italy.,Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland. bernd.schmitt@psi.ch.,Laboratory for Protein Functional and Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Kanagawa 230-0045, Japan; Division of Structural and Synthetic Biology, RIKEN Center for Life Science Technologies, Yokohama, Kanagawa 230-0045, Japan. Electronic address: kukimoto@riken.jp.,Department of Microbiology and Molecular Genetics, University of Vermont, Burlington, VT 05405, USA.,Department of Chemistry , University of California, Irvine , Irvine , California 92697-2025 , United States.,Department of Structural Biology, Weizmann Institute of Science, Rehovot, 7610001, Israel.,MOE Key Laboratory of Protein Science, Tsinghua University, Beijing, China.,GSK Medicines Research Centre, Gunnels Wood Road, Stevenage, Hertfordshire, SG1 2NY, UK.,Department of Materials and Life Sciences, Faculty of Science and Technology, Sophia University, 7-1 Kioi-cho, Chiyoda-ku, 102-8554, Tokyo, Japan.,From the Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario N1G 2W1, Canada mkimber@uoguelph.ca.,Institut National de la Santé et de la Recherche Médicale, Institut de Recherche en Infectiologie de Montpellier, Montpellier, France.,Department of Therapeutic Radiology, Yale University School of Medicine, New Haven, CT 06520, USA.,Department of Chemistry , Box H, Brown University , Providence , Rhode Island 02912-9108 , United States.,CRBM, "Equipe Labellisée Ligue Contre le Cancer", Univ Montpellier, CNRS, 34000 Montpellier, France.,Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.,School of Life Science, University of Science and Technology of China, Hefei, 230026, China.,School of Chemistry, University of Leeds, LS2 9JT Leeds, United Kingdom.,National Institute of Mental Health, Topolova 748, 250 67, Klecany, Czech Republic.,Beijing National Laboratory for Condensed Matter Physics and CAS Key Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing, China. mingli@iphy.ac.cn.,Department of Biosciences and Nutrition, Karolinska Institutet, Hälsovägen 7c, 14157, Huddinge, Sweden.,Department of Chemistry & Nanoscience Centre, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark.,Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.,the IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, 4200-135 Porto, Portugal.,Integrated Biotherapeutics, Rockville, MD, USA.,Institute for Molecular Biosciences and Center for Biomolecular Magnetic Resonance (BMRZ), Goethe-University Frankfurt, Max-von-Laue-Strasse 9, 60438 Frankfurt/M., Germany.,the Department of Biochemistry, Trinity College, Dublin 2, Ireland.,National Center for Advancing Translational Sciences, NIH, Rockville, MD 20850, USA.,Institute of Low Temperature Science, Hokkaido University Kita19-Nishi8, Kita-ku, 060-0819, Sapporo, Japan.,Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. nyoman.kurniawan@cai.uq.edu.au.,Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, United Kingdom.,CBS, Univ Montpellier, CNRS, INSERM, 34090 Montpellier, France.,Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC, Canada V6T 1Z3; Department of Chemistry, University of British Columbia, Vancouver, BC, Canada V6T 1Z1.,Tsinghua-Peking Joint Center for Life Sciences, Beijing, China. lixueming@mail.tsinghua.edu.cn.,School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, LS2 9JT Leeds, United Kingdom; s.p.muench@leeds.ac.uk.,Department of Chemistry , University of Natural Resources and Life Sciences , A-1190 Vienna , Austria.,Department of Pharmaceutical Chemistry, University of California at San Francisco, San Francisco, CA, USA. william.degrado@ucsf.edu.,Department of Biology, Indiana University Bloomington, Bloomington, IN, 47405, USA.,Tsinghua-Peking Joint Center for Life Sciences, Beijing, China. zhucheng_chen@tsinghua.edu.cn.,Institute of Physical Science and Information Technology, Anhui University, 111 Jiulong Road, Hefei, Anhui 230601, People's Republic of China.,Beijing Advanced Innovation Center for Structural Biology, Beijing, China.,NIST/IBBR, 9600 Gudelsky Drive, Rockville, MD 20850, USA.,Howard Hughes Medical Institute, Department of Biochemistry, Brandeis University, Waltham, MA, 02454, USA.,Istituto di Cristallografia, Consiglio Nazionale delle Ricerche, Area Science Park - Basovizza, S.S. n° 14-Km 163.5, I-34149, Trieste, Italy.,National Institute of Mental Health, Topolova 748, 250 67, Klecany, Czech Republic; Department of Chemistry, University of Hradec Kralove, Rokitanskeho 62, 500 03, Hradec Kralove, Czech Republic.,Johnson & Johnson Pharmaceutical Research and Development, L.L.C, 3210 Merryfield Row, San Diego, California 92121, United States.,Guangzhou Eighth People's Hospital, Guangzhou Medical University, Guangzhou 510060, China.,Department of Molecular and System Pharmacology, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan.,Max Planck Laboratory, Malopolska Centre of Biotechnology (MCB), Jagiellonian University, Krakow, 30-387, Poland. sebastian.glatt@uj.edu.pl.,Department of Chemistry, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, H3C 3J7, Canada.,Department of Nutrition, Food Sciences and Gastronomy, Faculty of Pharmacy and Food Sciences and Institute of Biomedicine (IBUB), University of Barcelona, Avda. Prat de la Riba 171, Santa Coloma de Gramenet, Spain.,Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, School of Dentistry, University of Copenhagen, Copenhagen, Denmark.,Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA. kartik.chandran@einstein.yu.edu.,School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, LS2 9JT Leeds, United Kingdom.,Department of Protein-DNA Interactions, Institute of Biotechnology, Vilnius University, Vilnius, Lithuania.,the Structural Biology Program and.,Structural Molecular Biology Group, Novo Nordisk Foundation Centre for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark. Electronic address: guillermo.montoya@cpr.ku.dk.,Department of Chemistry, University of Hradec Kralove, Rokitanskeho 62, 500 03, Hradec Kralove, Czech Republic; Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.,Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.,Department of Chemistry &Biochemistry and the Harper Cancer Research Institute, University of Notre Dame, Notre Dame, Indiana, USA.,Genome Sciences and Technology Program, University of British Columbia, Vancouver, BC, Canada V6T 1Z3; Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC, Canada V6T 1Z3.,Section of Microbiology and MRC Centre for Molecular Bacteriology and Infection, Imperial College London, London, SW7 2DD, UK.,UCIBIO, REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-516, Caparica, Portugal.,Instituto de Química Médica (IQM,CSIC), Juan de la Cierva 3, 28006, Madrid, Spain. empriego@iqm.csic.es.,Institute for Cell and Molecular Biosciences, University of Newcastle, Newcastle upon Tyne, NE2 4HH, UK.,Department of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK.,Department of Genetics, Yale University School of Medicine, New Haven, CT 06520, USA.,Program in Chemical Biology, Oregon Health & Science University, Portland, OR 97210, USA; Department of Physiology and Pharmacology, Oregon Health & Science University, Portland, OR 97210, United States. Electronic address: cohenmic@ohsu.edu.,Department of Virology, School of Public Health, Shandong University, Jinan, China.,Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA, USA. erica@scripps.edu.,Princess Margaret Cancer Centre, University Health Network, Toronto, ON, M5G 1L7, Canada.,Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. Electronic address: william.p.tansey@vanderbilt.edu.,Department of Biomolecular Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Japan.,CIC bioGUNE, Bizkaia Technology Park, Building 801A, 48170, Derio, Spain.,Department of Picobiology, Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo, 678-1297, Japan.,Department of Chemistry, Stony Brook University, Stony Brook, NY, 11794-3400, United states; Institute of Chemical Biology and Drug Discovery, Stony Brook University, Stony Brook, NY, 11794-3400, United states. Electronic address: iwao.ojima@stonybrook.edu.,School of Molecular and cellular Biology, Faculty of Biological Sciences, University of Leeds, LS2 9JT Leeds, United Kingdom.,Department of Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA.,Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Beijing, 100101, China. xfcao@genetics.ac.cn.,State Key Laboratory of Genetic Engineering, Collaborative Innovation Centre of Genetics and Development, Department of Biochemistry, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, 200433, China.,Unité de Recherche, Microbes, Evolution, Phylogeny and Infection, Institut Hospitalier Universitaire Méditerranée Infection, Marseille, France.,Department of Neurology, Charles University in Prague, Faculty of Medicine in Hradec Kralove and University Hospital, Simkova 870, 500 03, Hradec Kralove, Czech Republic.,University of Oxford, Nuffield Department of Medicine, NDMRB, Old Road Campus, OX3 7FZ, Oxford, UNITED KINGDOM.,Department of Biochemistry, University of Cambridge, CB2 1GA Cambridge, United Kingdom; fh111@cam.ac.uk.,Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy. massimo.bellanda@unipd.it.,From the Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario N1G 2W1, Canada.,Departments of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, United states.,Dipartimento di Scienze degli Alimenti e del Farmaco, Università degli Studi di Parma, Parco Area delle Scienze 27/A, 43124, Parma, Italy.,Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA. Electronic address: as4005@cumc.columbia.edu.,Department of Chemistry & Nanoscience Centre, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark. Electronic address: hatzakis@chem.ku.dk.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. d.craik@imb.uq.edu.au.,Division of Biochemistry, Department of Chemistry, Faculty of Science, University of Zagreb, Croatia.,Chair of Proteomics and Bioanalytics, Technical University of Munich, Emil-Erlenmeyer-Forum 5, 85354, Freising, Germany.,Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Pharmacology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Chemistry, Vanderbilt University, Nashville, TN 37232, USA.,IFN-CNR, Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy.,College of Physics and Information Science, Synergetic Innovation Center for Quantum Effects and Applications, Hunan Normal University, Changsha, 410081, Hunan, China.,Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory , Stanford University , Menlo Park , California 94025 , United States.,Biological Pharmacological Research Laboratories, Central Pharmaceutical Research Institute, Japan Tobacco Inc., 1-1, Murasaki-cho, Takatsuki, Osaka, 569-1125, Japan.,Department of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: gamarasinghe@wustl.edu.,Structural Molecular Biology Group, Novo Nordisk Foundation Centre for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark.,Glycosciences Laboratory, Department of Medicine, Imperial College London, London, United Kingdom.,Department of Biochemistry, University of Cambridge, CB2 1GA Cambridge, United Kingdom.,From the Institute for Protein Design.,College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China.,Institute for Glycomics, Gold Coast Campus, Griffith University, Queensland, 4222, Australia.,Department of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110, USA; The Andrew M. and Jane M. Bursky Center for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: diamond@wusm.wustl.edu.,Pharmaceutical Frontier Research Laboratories, Central Pharmaceutical Research Institute, Japan Tobacco Inc., 1-13-2, Fukuura, Kanazawa-Ku, Yokohama, Kanagawa, 236-0004, Japan.,RIKEN Center for Life Science Technologies, Kobe, Hyogo, 650-0047, Japan.,Department of Biochemistry and Biophysics, University of California at San Francisco, San Francisco, CA, USA.,Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong 2522, Australia. djadams@uow.edu.au.,Institute of Biophysics and Physical Biochemistry, University of Regensburg, Universitätsstrasse 31, 93053 Regensburg, Bavaria, Germany.,MOE Key Laboratory of Protein Science, Tsinghua University, Beijing, China. lixueming@mail.tsinghua.edu.cn.,School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK.,National Institute of Mental Health, Topolova 748, 250 67, Klecany, Czech Republic; Department of Toxicology and Military Pharmacy, Faculty of Military Health Sciences, Trebesska 1575, 500 01, Hradec Kralove, Czech Republic; Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.,Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy.,Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.,National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China. xiangxi@ibp.ac.cn hrliu@hunnu.edu.cn xzzhang@ibp.ac.cn wangjz@nicpbp.org.cn raozh@tsinghua.edu.cn.,Department of Chemistry , Fresno State University , 2555 East San Ramon Avenue, MS SB70 , Fresno , California 93740 , United States.,Department of Pathology, University of Texas Medical Branch, Galveston, TX, USA.,Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA.,York Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.,Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan. amtanok@mail.ecc.u-tokyo.ac.jp.,Molecular Physiology and Biological Physics, University of Virginia School of Medicine, Charlottesville, VA, 22908, USA.,From the Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario N1G 2W1, Canada and mkimber@uoguelph.ca.,Department of Biochemistry, University of Zurich, Zurich 8057, Switzerland.,Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.,Department of Structural Biology, Weizmann Institute of Science, Rehovot, 7610001, Israel. ron.diskin@weizmann.ac.il.,Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma (J.M.B., M.L.W., A.M.R., A.A.P.) and School of Biological Sciences, University of Auckland, Auckland, New Zealand (D.L.H.) augen-pioszak@ouhsc.edu.,Department of Chemistry, Yale University, New Haven, CT 06520, USA.,Department of Chemistry, University of Hradec Kralove, Rokitanskeho 62, 500 03, Hradec Kralove, Czech Republic; Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic. Electronic address: kamil.kuca@fnhk.cz.,School of Life Sciences, Anhui University, 111 Jiulong Road, Hefei, Anhui 230601, People's Republic of China.,From the Department of Biology, Washington University, St. Louis, Missouri 63130 and.,Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC, Canada V6T 1Z3.,From the Departments of Medicine and natasha.nesbitt@stonybrook.edu.,Postgraduate School of Molecular Medicine, Warsaw, 02-091, Poland.,Bionanoscience and Biochemistry Laboratory, Malopolska Centre of Biotechnology (MCB), Jagiellonian University, Krakow, 30-387, Poland.,School of Life Sciences, University of Dundee, Dundee, United Kingdom.,Department of Pharmacy and Biotechnology, Alma Mater Studiorum-University of Bologna, Via Belmeloro 6, I-40126, Bologna, Italy.,Laboratory for Protein Functional and Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Kanagawa 230-0045, Japan; Division of Structural and Synthetic Biology, RIKEN Center for Life Science Technologies, Yokohama, Kanagawa 230-0045, Japan. Electronic address: mikako.shirouzu@riken.jp.,University of Oxford, Structural Genomics Consortium, NDMRB, Roosevelt Drive, OX3 7FZ, Oxford, UNITED KINGDOM.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. justine.hill1@gmail.com.,Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.,Chemistry and Physics, State University of New York at Stony Brook, Stony Brook, New York 11794-8151, jin.wang.1@stonybrook.edu.,Beijing Advanced Innovation Center for Structural Biology, Beijing, China. zhucheng_chen@tsinghua.edu.cn.,Department of Chemistry, University of Hradec Kralove, Rokitanskeho 62, 500 03, Hradec Kralove, Czech Republic.,State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China.,School of Pharmacy, Sungkyunkwan University, Suwon, Republic of Korea.,Department CIBIO, University of Trento, via Sommarive 9, 38123, Povo, Italy.,Institut für Biologie, Strukturbiologie/Biochemie, Humboldt-Universität zu Berlin, D-10099 Berlin, Germany.,Laboratory for Protein Functional and Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Kanagawa 230-0045, Japan; Division of Structural and Synthetic Biology, RIKEN Center for Life Science Technologies, Yokohama, Kanagawa 230-0045, Japan.,Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, 50019, Sesto Fiorentino (FI), Italy.,Department of Cell and Systems Biology, University of Toronto, Toronto, ON, M5S 3G5, Canada.,Department of Pharmacology and Chemical Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA. chengzh@pitt.edu.,Integrated Structural Biology Grenoble (ISBG) - UMS 3518 (CNRS-CEA-UJF-EMBL), 38044, Grenoble, France.,Department of Chemistry, Washington University, St. Louis, MO 63130, USA.,Laboratory of Structural Biology, School of Medicine, Tsinghua University, Beijing, 100084, China.,Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, 30-387, Poland.,Cardiovascular Research Institute, University of California at San Francisco, San Francisco, CA, USA.,Centre National de la Recherche Scientifique, Campus Joseph Aiguier, Marseille, France.,Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, University of Newcastle, Newcastle upon Tyne, NE2 4AX, UK.,Shanghai Institute for Advanced Immunochemical Studies, ShanghaiTech University, Shanghai, 201210, China.,Université François Rabelais de Tours, UMR1282 Infectiologie et Santé Publique, F-37000, Tours, France.,Department of Plant Pathology, University of California, Davis, Davis, California, United States of America.,National Institute of Chemistry, Ljubljana, Slovenia.,School of Life Science, Tsinghua University, Beijing, China.,Department of Biochemistry & Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA; Department of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX 77555, USA; Institute for Translational Science, University of Texas Medical Branch, Galveston, TX 77555, USA; Institute for Human Infections and Immunity, University of Texas Medical Branch, Galveston, TX 77555, USA.,Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw 02-106, Poland.,Orphagen Pharmaceuticals, 11558 Sorrento Valley Road, Suite 4, San Diego, California, 92121, USA.,Molecular Physiology and Biological Physics, University of Virginia School of Medicine, Charlottesville, VA, 22908, USA. jochen_zimmer@virginia.edu.,Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA. erica@scripps.edu.,School of Life Science, Tsinghua University, Beijing, China. zhucheng_chen@tsinghua.edu.cn.,Ramaciotti Centre for Electron Microscopy, Monash University, Clayton, 3800, Australia.,Institute for Pharmaceutical Chemistry, Johann Wolfgang Goethe University, Max-von-Laue-Straße 9, 60438, Frankfurt am Main, Germany.,Institute for Neurodegenerative Diseases, University of California at San Francisco, San Francisco, CA, USA. william.degrado@ucsf.edu.,Malopolska Centre of Biotechnology (MCB), Jagiellonian University, Krakow, 30-387, Poland.,Department of Cancer Biology and Cell Biology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, 02215, USA.,Department of Pharmacy and Biotechnology, Alma Mater Studiorum-University of Bologna, Via Belmeloro 6, I-40126, Bologna, Italy. Electronic address: marialaura.bolognesi@unibo.it.,Howard Hughes Medical Institute, Dallas, TX 75390, USA.,Institute for Cell and Molecular Biosciences, University of Newcastle, Newcastle upon Tyne, NE2 4HH, UK. r.lewis@ncl.ac.uk.,Division of Infectious Diseases, University of Cincinnati College of Medicine, Cincinnati, Ohio, USA.,Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.,Department of Protein Structure, Function and Design, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan. Electronic address: ueda@phar.kyushu-u.ac.jp.,Laboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institut, 5232, Villigen, Switzerland.,Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Harold C. Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA; Hamon Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA. Electronic address: vincent.tagliabracci@utsouthwestern.edu.,Center for Fiber and Textile Science, Kyoto Institute of Technology, Japan.,School of Life Science, Tsinghua University, Beijing, China. lixueming@mail.tsinghua.edu.cn.,University of Oxford, Structural Genetics Consortium, ORCRB, Old Road Campus, OX3 7DQ, Oxford, UNITED KINGDOM.,The RIKEN SPring-8 Center, 1-1-1 Koto, Sayo-cho, Sato-gun, Hyogo, 678-5248, Japan.,Affiliated Cancer Hospital and Institute of Guangzhou Medical University , Guangzhou , Guangdong 511436 , China.,University of Basel, Biozentrum, CH-4056, Basel, Switzerland.,From the Departamento de Bioquímica, Facultad de Química and.,College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China; State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei 430070, China. Electronic address: hejin@mail.hzau.edu.cn.,Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma (J.M.B., M.L.W., A.M.R., A.A.P.) and School of Biological Sciences, University of Auckland, Auckland, New Zealand (D.L.H.).,the i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, 4200-135 Porto, Portugal, and.,Cambridge Graphene Centre, University of Cambridge, 9 JJ Thomson Avenue, Cambridge, CB3 OFA, UK.,Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea. Electronic address: bwhan@snu.ac.kr.,IGF, Univ Montpellier, CNRS, INSERM, 34090 Montpellier, France.,DLX Scientific, Lawrence, KS, USA. lijunliuks@gmail.com.,Department of Pharmaceutical Chemistry, University of Debrecen, 4032, Debrecen, Hungary.,Dept. of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, United Kingdom.,Department of Anesthesiology, Stony Brook University, Stony Brook, NY, 11794-8480, United states.,Department of Immunology and Microbiology, University of Texas Medical Branch, Galveston, TX, USA.,Dipartimento di Scienze Matematiche, Fisiche e Informatiche, Università degli Studi di Parma, Parco Area delle Scienze 7/A, 43124, Parma, Italy.,Department of Pharmaceutical Chemistry, University of California at San Francisco, San Francisco, CA, USA. xiaokun.shu@ucsf.edu.,Key Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China zhaojund@126.com.,the State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, ChangChun, Jilin 130022, China.,Department of Biology and Konstanz Research School Chemical Biology, University of Konstanz, Universitätsstrasse 10, 78457, Konstanz, Germany.,Department of Molecular and Cellular Biology , University of Guelph , Guelph , Ontario N1G 2W1 , Canada.,National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.,Department of Biology, Southern University of Science and Technology, Shenzhen, China.,Astbury Centre for Structural and Molecular Biology, University of Leeds, LS2 9JT Leeds, United Kingdom.,Departamento de Biología Comparada, Facultad de Ciencias, Universidad Nacional Autónoma de México, Ciudad Universitaria, 04510 Ciudad de México, México.,Institute of Scientific and Industrial Research, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka, 567-0047, Japan.,Department of Pharmaceutical Chemistry , University of California San Francisco , San Francisco , California 94158 , United States.,Science for Life Laboratory, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.,Galveston National Laboratory, University of Texas Medical Branch, Galveston, TX, USA.,Princess Margaret Cancer Centre, University Health Network, Toronto, ON, M5G 1L7, Canada. mitsu.ikura@uhnresearch.ca.,Dipartimento di Scienze Matematiche, Fisiche e Informatiche, Università degli Studi di Parma, Parco Area delle Scienze 7/A, 43124, Parma, Italy. stefania.abbruzzetti@unipr.it.,IHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.,State Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300353, China.,Department of Toxicology and Military Pharmacy, Faculty of Military Health Sciences, Trebesska 1575, 500 01, Hradec Kralove, Czech Republic.,Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.,From the Institute for Protein Design, chris.bahl@proteininnovation.org.,the Institute for Protein Innovation, Boston, Massachusetts 02115.,Institut für Biologie, Strukturbiologie/Biochemie, Humboldt-Universität zu Berlin, D-10099 Berlin, Germany holger.dobbek@biologie.hu-berlin.de.,Beijing National Laboratory for Condensed Matter Physics and CAS Key Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing, China.,CBS, Univ Montpellier, CNRS, INSERM, 34090 Montpellier, France. Electronic address: gilles.labesse@cbs.cnrs.fr.,Center for BioImaging Sciences, National University of Singapore, Singapore, Singapore.,Institute of Clinical Biochemistry and Diagnosis, University Hospital, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.,Department of Biomedical Sciences (Unidad Asociada IQM,CSIC) and Instituto de Investigación Quimica "Andrés M. del Río" (IQAR), University of Alcalá, Unidad Asociada CSIC, 28805 Alcalá de Henares, Madrid, Spain.,Biostructural Mechanism Laboratory, RIKEN, SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan; Advanced Electron Microscope Development Unit, RIKEN-JEOL Collaboration Center, RIKEN Baton Zone Program, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan. Electronic address: yone@spring8.or.jp.,Cell and Molecular Sciences Group, Dundee Effector Consortium, James Hutton Institute, Invergowrie, Dundee, United Kingdom.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. peta.harvey@imb.uq.edu.au.,Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, 565-0871, Osaka, Japan.,Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa, 920-1192, Japan.,Department of Pharmaceutical and Pharmacological Sciences, University of Padova, 35131 Padova, Italy.,Institute of Organic Chemistry, Centre for Molecular Biosciences (CMBI), University of Innsbruck, Innrain 80/82, 6020 Innsbruck, Austria.,Howard Hughes Medical Institute, University of Washington, Seattle, Washington 98195.,Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden. dan.sjostrand@dbb.su.se.,School of Life Sciences, Jawaharlal Nehru University, New Delhi, India.,Instituto de Biocomputación y Fisica de Sistemas Complejos (BIFI), BIFI-IQFR (CSIC) Joint Unit, Universidad de Zaragoza, 50018, Zaragoza, Spain.,Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.,National Institute of Public Health-National Institute of Hygiene, Chocimska 24, PL-00791, Warsaw, Poland.,Structural Genomics Consortium, Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt, Frankfurt am Main, Germany.,Instituto de Química Médica (IQM,CSIC), Juan de la Cierva 3, 28006, Madrid, Spain.,Medicinal Bioconvergence Research Center, Seoul National University, Seoul 08826, Republic of Korea.,Faculty of Agriculture and Biology, Warsaw University of Life Sciences, Warsaw 02-776, Poland.,European Molecular Biology Laboratory (EMBL), Cell Biology and Biophysics Unit, Meyerhofstrasse 1, 69117 Heidelberg, Germany; EMBL, Heidelberg University, Heidelberg, Germany.,Department of Biothermodynamics and Drug Design, Institute of Biotechnology, Vilnius University, Vilnius, Lithuania.,Institut de biologie moléculaire des plantes, CNRS, Université de Strasbourg, Strasbourg Cedex, France.,Structural Proteomics Unit, Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, 7610001, Israel.,Howard Hughes Medical Institute, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, New York 10065, and.,Biomedical Sciences Research Complex, University of St. Andrews, St. Andrews, Fife, Scotland, KY16 9ST, UK.,Institut Pasteur de Montevideo, Mataojo 2020, 11400, Montevideo, Uruguay.,From the Departamento de Bioquímica, Facultad de Química and clares@unam.mx.,School of Biology, Faculty of Biology Medicine and Health, Michael Smith Building, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK.,Savaid Medical School, University of Chinese Academy of Sciences, Beijing, 101408, China.,Departments of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, United states; Institute of Chemical Biology and Drug Discovery, Stony Brook University, Stony Brook, NY, 11794-3400, United states.,Fundación ARAID, 50018, Zaragoza, Spain.,Department of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.,Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada V6T 1Z3.,Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, 27100, Pavia, Italy.,Department of Biochemistry, and.,eBIC, Diamond Light Source Ltd, Diamond House, Harwell Science & Innovation Campus, Oxfordshire, Didcot, OX11 0DE, UK.,University of Chinese Academy of Sciences, Beijing, 101408, China.,Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.,Centro de Investigaciones Biológicas (CIB,CSIC), Ramiro de Maeztu 9, 28040, Madrid, Spain.,Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Howard Hughes Medical Institute, Dallas, TX 75390, USA; Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.,INRA, UMR1282 Infectiologie et Santé Publique, F-37380, Nouzilly, France.,Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY, 11794-3600, United states.,Division of Structural and Synthetic Biology, RIKEN Center for Life Science Technologies, Yokohama, Kanagawa 230-0045, Japan.,German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.,Pharmaceutical Frontier Research Laboratories, Central Pharmaceutical Research Institute, Japan Tobacco Inc., 1-13-2, Fukuura, Kanazawa-Ku, Yokohama, Kanagawa, 236-0004, Japan. tsuyoshi.adachi@jt.com.,Department of Chemistry, Biomedicinskt Centrum (BMC), Uppsala University, 751 23 Uppsala, Sweden.,New England Biolabs, 240 County Road, Ipswich, MA, 01938, USA.,Fachbereich Biologie, Universität Konstanz, Konstanz, Germany.,Mapp Biopharmaceutical, San Diego, CA, USA.,Department of Industrial Biotechnology, Faculty of Agro-Industry, Prince of Songkla University, Hat Yai, Thailand.,Department of Cellular and Molecular Biology, Northwestern University Feinberg School of Medicine, Chicago, IL, 60611, USA.,From the Departments of Medicine and.,Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.,Department of Chemistry and Biochemistry , University of Wisconsin-Milwaukee , Milwaukee , Wisconsin 53201 , United States.,State Key Laboratory of Biotherapy and Cancer Center, West China Hospital , Sichuan University, and Collaborative Innovation Center of Biotherapy , Chengdu , Sichuan 610041 , China.,Department of Molecular and Cellular Biology, University of California, Davis, Davis, California, United States of America.,Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN 37232, USA.,Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, 60611, USA.,Division of Virology, United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, MD, USA.,Department of Analytical Chemistry, University of Chemistry and Technology Prague, Technicka 5, 166 28, Prague, Czech Republic.,Departments of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, United states; Department of Anesthesiology, Stony Brook University, Stony Brook, NY, 11794-8480, United states; Institute of Chemical Biology and Drug Discovery, Stony Brook University, Stony Brook, NY, 11794-3400, United states.,State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China. xfcao@genetics.ac.cn.,From the Department of Biology, Washington University, St. Louis, Missouri 63130 and jjez@wustl.edu.,Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY, 11794-3600, United states; Institute of Chemical Biology and Drug Discovery, Stony Brook University, Stony Brook, NY, 11794-3400, United states.,FG11 Division of Enteropathogenic Bacteria and Legionella, Robert Koch Institute, Burgstrasse 37, 38855, Wernigerode, Germany.,Graduate School of Science and Technology, Sophia University, 7-1 Kioi-cho, Chiyoda-ku, 102-8554, Tokyo, Japan.,School of Biological Sciences, Nanyang Technological University, Singapore, Singapore.,State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China.,Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.,Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, PA, 15260, USA.,School of Chemistry, Monash University, Clayton, 3800, Australia.,College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China; National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University, Wuhan, Hubei 430070, China.,Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Howard Hughes Medical Institute, Dallas, TX 75390, USA; Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.,Howard Hughes Medical Institute, Department of Biochemistry, Brandeis University, Waltham, MA, 02454, USA. dkern@brandeis.edu.,University of Chinese Academy of Sciences, Beijing, 100049, China. xfcao@genetics.ac.cn.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. Dorien.VanLysebetten@UGent.be.,RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.,Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.,Department of Chemistry, University of California, Davis, Davis, California, United States of America.,Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom.,Ikerbasque, Basque Foundation for Science, Maria Diaz de Haro 13, 48009, Bilbao, Spain.,Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong 2522, Australia. jeffreym@uow.edu.au.,Human Health Therapeutics Portfolio , National Research Council Canada , 100 Sussex Drive , Ottawa , Ontario , Canada K1A 0R6.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. t.durek@uq.edu.au.,Department of Chemical Research Support, Weizmann Institute of Science, Rehovot, 7610001, Israel.,Department of Chemistry, University of Illinois, Urbana, IL, 61801, USA.,Banting and Best Department of Medical Research and Department of Molecular Genetics, University of Toronto, Terrence Donnelly Centre for Cellular &Biomolecular Research, Toronto, Ontario, Canada.,Department of Organic Chemistry, Faculty of Chemistry, University of Łódź, Tamka 12, PL-91403 Łódź, Poland.,EN-FIST Center of Excellence, 1000 Ljubljana, Slovenia.,College of Pharmacy, Chung-Ang University, Seoul 06974, Republic of Korea.,the Department of Agronomy and Horticulture, University of Nebraska, Lincoln, Nebraska 68588.,Department of Organic Chemistry II, Faculty of Science & Technology, University of the Basque Country, 48940, Leioa, Bizkaia, Spain.,Institute of Scientific and Industrial Research, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka, 567-0047, Japan. nishino@sanken.osaka-u.ac.jp.,Biochemistry, University of Utah, Salt Lake City, Utah 84112.,New College of Florida, Sarasota, FL 34243, USA.,Laboratorio de Fisicoquímica Biológica, Instituto de Química Biológica, Facultad de Ciencias, Universidad de la República, Igua 4425, 11400, Montevideo, Uruguay.,Department of Oncological Sciences, School of Medicine, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112-5550, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815-6789, USA.,Tsinghua-Peking Joint Center for Life Sciences, Beijing, China.,Cardiovascular Research Institute, University of California at San Francisco, San Francisco, CA, USA. xiaokun.shu@ucsf.edu.,Department of Chemistry, University of Pennsylvania, Philadelphia, PA, USA.,Department of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino (FI), Italy.,Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki, Aoba-ku, Sendai, Miyagi, 980-8578, Japan.,Genome Sciences and Technology Program, University of British Columbia, Vancouver, BC, Canada V6T 1Z3; Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC, Canada V6T 1Z3; Department of Chemistry, University of British Columbia, Vancouver, BC, Canada V6T 1Z1; Michael Smith Laboratories, University of British Columbia, Vancouver, BC, Canada V6T 1Z4. Electronic address: mcintosh@chem.ubc.ca.,From the Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario N1G 2W1, Canada and.,Cryo-Electron Microscopy, Bijvoet Center for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.,Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Australia. thomas.dash@imb.uq.edu.au.,CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.,Department of Protein Structure, Function and Design, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan.,CNRS UMR 9004, Institut de Recherche en Infectiologie de Montpellier, Université de Montpellier, Montpellier, France.,Illawarra Health and Medical Research Institute, University of Wollongong, Wollongong 2522, Australia. rfinolu@uow.edu.au.,Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden. hogbom@dbb.su.se.,Sinovac Biotech Co., Ltd., Beijing, 100085, China.,Crystal and Structural Chemistry, Bijvoet Center for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands. p.gros@uu.nl.,Michael Smith Laboratories, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.,Department of Pharmacology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Chemistry, Vanderbilt University, Nashville, TN 37232, USA.,Faculty of Chemistry and Chemical Technology, University of Ljubljana, 1000 Ljubljana, Slovenia.,Department of Pharmacology and Chemical Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.,Department of Chemistry and Biochemistry, University of Bern, Bern, Switzerland. christoph.vonballmoos@dcb.unibe.ch.,Kaplan Medical Center, Rehovot, affiliated to the School of Medicine, Hebrew University, Jerusalem, 7661041, Israel. Oren.Zimhony@weizmann.ac.il.,Slovenian NMR Center, National Institute of Chemistry, 1000 Ljubljana, Slovenia.,Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, ON, M5S 3G9, Canada.,Beijing Advanced Innovation Center for Structural Biology, Beijing, China. lixueming@mail.tsinghua.edu.cn.,Rega Institute for Medical Research, KU Leuven, Herestraat 49, B-3000, Leuven, Belgium.,Department of Nutrition, Food Sciences and Gastronomy, Faculty of Pharmacy and Food Sciences and Institute of Biomedicine (IBUB), University of Barcelona, Avda. Prat de la Riba 171, Santa Coloma de Gramenet, Spain. fjluque@ub.edu.,Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia; Moscow Institute of Physics and Technology (State University), Dolgoprudny, Moscow Oblast 141700, Russia.,Department of Chemical and Biomolecular Engineering, University of Illinois, Urbana, IL, 61801, USA.,School of Biology, Faculty of Biology Medicine and Health, Michael Smith Building, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK. robert.ford@manchester.ac.uk.,MRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK. ccharent@mrc-lmb.cam.ac.uk mwilkin@mrc-lmb.cam.ac.uk kn@mrc-lmb.cam.ac.uk.,Department of Pharmaceutical Chemistry, University of California at San Francisco, San Francisco, CA, USA.,Bioinformatics Institute (BII), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.,Department of Chemistry and Konstanz Research School Chemical Biology, University of Konstanz, Universitätsstrasse 10, 7857, Konstanz, Germany.,Department of Pharmaceutical Chemistry and Drug Control, Faculty of Pharmacy in Hradec Kralove, Charles University in Prague, Heyrovskeho 1203, 500 05, Hradec Kralove, Czech Republic.,Graduate School of Comprehensive Rehabilitation, College of Health and Human Sciences, Osaka Prefecture University, Habikino, Japan.,National Institutes for Food and Drug Control, No. 2, Tiantanxili, Beijing, 100050, China. xiangxi@ibp.ac.cn hrliu@hunnu.edu.cn xzzhang@ibp.ac.cn wangjz@nicpbp.org.cn raozh@tsinghua.edu.cn.,CRBM, "Equipe Labellisée Ligue Contre le Cancer", Univ Montpellier, CNRS, 34000 Montpellier, France. Electronic address: serge.roche@crbm.cnrs.fr.,Institut de Recherche Biomédicale des Armées, Département de Toxicologie et Risques Chimiques, 1 Place Général Valérie André, 91220, Brétigny-sur-Orge, France.,From the Departments of Chemistry and.,Dipartimento di Scienze Matematiche, Fisiche e Informatiche, Università degli Studi di Parma, Parco Area delle Scienze 7/A, 43124, Parma, Italy. cristiano.viappiani@unipr.it.,Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland. meitian.wang@psi.ch.,Institut de Biologie Structurale (IBS), Univ. Grenoble Alpes, CEA, CNRS, 38044, Grenoble, France. thibaut.crepin@ibs.fr.,State Key Laboratory of Genetic Engineering, Collaborative Innovation Centre of Genetics and Development, Department of Biochemistry, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, 200433, China. majb@fudan.edu.cn.,Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.,Department of Structural Biology , St. Jude Children's Research Hospital , Memphis , Tennessee 38105 , United States.,Division of General and Inorganic Chemistry, Department of Chemistry, Faculty of Science, University of Zagreb, Croatia.,Department of Chemistry, Stony Brook University, Stony Brook, NY, 11794-3400, United states.,Chemical Research Laboratories, Central Pharmaceutical Research Institute, Japan Tobacco Inc., 1-1, Murasaki-cho, Takatsuki, Osaka, 569-1125, Japan.,National Institute of Mental Health, Topolova 748, 250 67, Klecany, Czech Republic; Institute of Physiology, Czech Academy of Sciences, Videnska 1083, 142 20, Prague, Czech Republic.,Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.,ISGlobal, Hospital-Clinic-Universitat de Barcelona, Barcelona, Spain.,Department of Medical Biophysics, University of Toronto, Toronto, ON, M5G 1L7, Canada. mitsu.ikura@uhnresearch.ca.,Therapeutic Target Discovery Branch, Division of Precision Medicine and Cancer Informatics, Research Institute, National Cancer Center, Goyang-si, Gyeonggi-do 10408, Republic of Korea.,Institute of Molecular Biotechnology, IMBA, Vienna Biocenter Campus (VBC), Vienna 1030, Austria.,Faculty of Pharmacy and Biochemistry, University of Zagreb, Ante Kovačića 1, Zagreb, Croatia.,Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, 565-0871, Osaka, Japan. nishino@sanken.osaka-u.ac.jp.,Biotechnical faculty, University of Ljubljana, Slovenia.,Molecular Modeling Section (MMS), Department of Pharmaceutical and Pharmacological Sciences, University of Padova, via Marzolo 5, Padova, Italy.,From the Departments of Chemistry and koehntop@chem.utah.edu.,Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA; Integrated Program in Cellular, Molecular and Biomedical Studies, Columbia University, New York, NY 10032, USA.,Department of Biochemistry and Microbiology , University of Victoria , P.O. Box 3055 STN CSC, Victoria , British Columbia , Canada V8P 3P6.,Center for Biomolecular Magnetic Resonance (BMRZ), Institute for Organic Chemistry and Chemical Biology, Johann Wolfgang Goethe University, Max-von-Laue-Straße 7, 60438, Frankfurt am Main, Germany.,Max Planck Laboratory, Malopolska Centre of Biotechnology (MCB), Jagiellonian University, Krakow, 30-387, Poland.,Department of Biochemistry & Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.,University of Chinese Academy of Sciences, Beijing, 100049, China.,Princess Margaret Cancer Centre, University Health Network, Toronto, ON, M5G 1L7, Canada. noboru.ishiyama@uhnresearch.ca.,Max-Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470, Mülheim an der Ruhr, Germany.,Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (UMR 5280 - CNRS, ENS Lyon, UCB Lyon 1), Université de Lyon, 5 rue de la Doua, 69100, Villeurbanne, France.,Cardiovascular Research Institute, University of California at San Francisco, San Francisco, CA, USA. william.degrado@ucsf.edu.,Institute for Inorganic Chemistry, Goethe University Frankfurt, Frankfurt am Main, Germany.,Department of Chemistry and Biochemistry, University of Bern, Bern, Switzerland.,College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China; State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei 430070, China.,Institute of Chemical Biology and Drug Discovery, Stony Brook University, Stony Brook, NY, 11794-3400, United states.




Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Histone H3.2
A, E
135Xenopus laevisMutation(s): 0 
Find proteins for P84233 (Xenopus laevis)
Go to UniProtKB:  P84233
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Histone H4
B, F
102Xenopus laevisMutation(s): 0 
Find proteins for P62799 (Xenopus laevis)
Go to UniProtKB:  P62799
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Histone H2A
C, G
129Xenopus laevisMutation(s): 0 
Find proteins for P06897 (Xenopus laevis)
Go to UniProtKB:  P06897
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Histone H2B 1.1
D, H
122Xenopus laevisMutation(s): 0 
Find proteins for P02281 (Xenopus laevis)
Go to UniProtKB:  P02281
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
Transcription regulatory protein SNF2
O
735Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: SNF2 (GAM1, RIC1, SWI2, TYE3)
EC: 3.6.4.-
Find proteins for P22082 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  P22082
Entity ID: 5
MoleculeChainsLengthOrganism
DNA (167-MER)I167synthetic construct
Entity ID: 6
MoleculeChainsLengthOrganism
DNA (167-MER)J167synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.31 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Key Research and Development ProgramChina2017YFA0102900

Revision History 

  • Version 1.0: 2019-04-03
    Type: Initial release