5Z33 | pdb_00005z33

Crystal structure of Mitogen-activated Protein Kinase Mps1 in Magnaporthe oryzae

PDB DOI: https://doi.org/10.2210/pdb5Z33/pdb

Classification: TRANSFERASE
Organism(s): Pyricularia oryzae P131
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2018-01-05 Released: 2019-03-20
Deposition Author(s): Zhou, F., Liu, J.F., Zhang, G.Z.
Funding Organization(s): National Key Research and Development Plan

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.99 Å
R-Value Free:
0.222 (Depositor), 0.232 (DCC)
R-Value Work:
0.187 (Depositor), 0.196 (DCC)
R-Value Observed:
0.189 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 5Z33

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Mitogen-activated Protein Kinase Mps1 in Magnaporthe oryzae

Zhou, F., Peng, J.B., Zhao, Y.X., Chen, X., Zhang, Y.Y., Peng, Y.L., Liu, J.F., Zhang, G.Z.

To be published.

Macromolecule Content

Total Structure Weight: 48.31 kDa
Atom Count: 3,164
Modeled Residue Count: 375
Deposited Residue Count: 425
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mitogen-activated protein kinase	A	425	Pyricularia oryzae P131	Mutation(s): 0 Gene Names: MPS1 EC: 2.7.11.24
UniProt
Find proteins for G4N374 (Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)) Explore G4N374 Go to UniProtKB: G4N374
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	G4N374
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.99 Å
R-Value Free: 0.222 (Depositor), 0.232 (DCC)
R-Value Work: 0.187 (Depositor), 0.196 (DCC)
R-Value Observed: 0.189 (Depositor)

Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 74.549	α = 90
b = 74.549	β = 90
c = 158.561	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
AutoSol	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2019-03-20

Deposition Author(s):

Funding Organization	Location	Grant Number
National Key Research and Development Plan	China	No.2017YFD0200500
National Key Research and Development Plan	China	No.2017YFD0201100

Revision History (Full details and data files)

Version 1.0: 2019-03-20
Type: Initial release
Version 1.1: 2024-03-27
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.