Biological Assembly 1  

 3D View: Structure | Electron Density

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 176.37 kDa 
• Atom Count: 13190 
• Residue Count: 1516 
• Unique protein chains: 1

5YXT

Glycoside hydrolase family 8 Xylanase

• DOI: 10.2210/pdb5YXT/pdb

• Classification: HYDROLASE
• Organism(s): Paenibacillus barengoltzii G22
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2017-12-07 Released: 2018-12-12 
• Deposition Author(s): Jiang, Z.Q., You, X., Huang, P., Ma, J.W.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.88 Å
• R-Value Free: 0.289 
• R-Value Work: 0.244 
• R-Value Observed: 0.245 

Literature

Structure of glycoside hydrolase family 8 xylanase at 1.88 Angstroms resolution

Jiang, Z.Q., You, X., Huang, P., Ma, J.W.

To be published.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Reducing end xylose-releasing exo-oligoxylanase	A, B, C, D	382	Paenibacillus barengoltzii G22	Mutation(s): 0  Gene Names: C812_03928
Find proteins for R9L536 (Paenibacillus barengoltzii G22) Explore R9L536  Go to UniProtKB:  R9L536

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.88 Å
• R-Value Free: 0.289 
• R-Value Work: 0.244 
• R-Value Observed: 0.245 
• Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 54.57	α = 100.34
b = 78.99	β = 95.86
c = 89.148	γ = 106.35

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2017-12-07 
• Released Date: 2018-12-12 
Deposition Author(s): Jiang, Z.Q., You, X., Huang, P., Ma, J.W.

Revision History 

• Version 1.0: 2018-12-12
  Type: Initial release