5YXE

Crystal Structure Analysis of feline serum albumin

PDB DOI: https://doi.org/10.2210/pdb5YXE/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Felis catus
Expression System: Komagataella phaffii GS115
Mutation(s): No

Deposited: 2017-12-05 Released: 2018-04-04
Deposition Author(s): Kihira, K., Yokomaku, K., Akiyama, M., Morita, Y., Komatsu, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.40 Å
R-Value Free: 0.297
R-Value Work: 0.286
R-Value Observed: 0.286

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Core-shell protein cluster comprising haemoglobin and recombinant feline serum albumin as an artificial O2 carrier for cats

Yokomaku, K., Akiyama, M., Morita, Y., Kihira, K., Komatsu, T.

(2018) J Mater Chem B

DOI: https://doi.org/10.1039/C8TB00211H

Macromolecule Content

Total Structure Weight: 65.94 kDa
Atom Count: 4,391
Modelled Residue Count: 572
Deposited Residue Count: 584
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Serum albumin	A	584	Felis catus	Mutation(s): 0 Gene Names: ALB
UniProt
Find proteins for P49064 (Felis catus) Explore P49064 Go to UniProtKB: P49064
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P49064
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.40 Å
R-Value Free: 0.297
R-Value Work: 0.286
R-Value Observed: 0.286
Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 106.908	α = 90
b = 49.145	β = 110.171
c = 123.869	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
REFMAC	refinement
XDS	data reduction
XDS	data scaling
MOLREP	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2018-04-04

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2018-04-04
Type: Initial release
Version 1.1: 2023-11-22
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.