5YBD

X-ray structure of ETS domain of Ergp55 in complex with E74DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.769 Å
  • R-Value Free: 0.282 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Comparative structure analysis of the ETSi domain of ERG3 and its complex with the E74 promoter DNA sequence

Sharma, R.Gangwar, S.P.Saxena, A.K.

(2018) Acta Crystallogr F Struct Biol Commun 74: 656-663


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcriptional regulator ERG
A, X
97Homo sapiensMutation(s): 0 
Gene Names: ERG
Find proteins for P11308 (Homo sapiens)
Go to Gene View: ERG
Go to UniProtKB:  P11308
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(P*AP*CP*CP*GP*GP*AP*AP*GP*T)-3')B,Y9Drosophila saltans
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(P*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3')C,Z10Drosophila adunca
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.769 Å
  • R-Value Free: 0.282 
  • R-Value Work: 0.204 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 39.279α = 90.00
b = 233.871β = 90.00
c = 80.524γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
PHASERphasing
DENZOdata collection
PHENIXrefinement
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Science and TechnologyIndiaSR/SO/HS-05/2009

Revision History 

  • Version 1.0: 2018-11-14
    Type: Initial release