5Y7Y

Crystal structure of AhRR/ARNT complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.234 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The crystal structure of the AhRR-ARNT heterodimer reveals the structural basis of the repression of AhR-mediated transcription.

Sakurai, S.Shimizu, T.Ohto, U.

(2017) J. Biol. Chem. 292: 17609-17616


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aryl hydrocarbon receptor repressor
A
258Homo sapiensMutation(s): 0 
Gene Names: AHRR (BHLHE77, KIAA1234)
Find proteins for A9YTQ3 (Homo sapiens)
Go to Gene View: AHRR
Go to UniProtKB:  A9YTQ3
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Aryl hydrocarbon receptor nuclear translocator
B
311Bos taurusMutation(s): 0 
Gene Names: ARNT
Find proteins for Q9BE97 (Bos taurus)
Go to Gene View: ARNT
Go to UniProtKB:  Q9BE97
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.234 
  • Space Group: P 41
Unit Cell:
Length (Å)Angle (°)
a = 78.362α = 90.00
b = 78.362β = 90.00
c = 129.784γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-09-20
    Type: Initial release
  • Version 1.1: 2018-02-21
    Type: Database references