5Y7Q

Crystal structure of Nuclease


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.193 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Mechanism of DNA Interstrand Cross-link Unhooking by Bacterial FAN1 Nuclease

Jin, H.Roy, U.Lee, G.Scharer, O.D.Cho, Y.

(2018) J.Biol.Chem. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Fanconi-associated nuclease 1 homolog
A
580Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Gene Names: fan1
EC: 3.1.4.1
Find proteins for Q9I2N0 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Go to UniProtKB:  Q9I2N0
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(P*GP*TP*TP*GP*GP*GP*AP*TP*TP*G)-3')D10synthetic construct
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(*TP*TP*CP*AP*CP*AP*CP*AP*TP*TP*CP*AP*A)-3')B13synthetic construct
Entity ID: 4
MoleculeChainsLengthOrganism
DNA (5'-D(P*GP*AP*AP*TP*GP*TP*GP*TP*GP*TP*CP*TP*CP*AP*AP*TP*CP*CP*CP*AP*AP*CP*TP*T)-3')C24synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.193 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 80.845α = 90.00
b = 104.560β = 90.00
c = 105.243γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
HKL-2000data collection
HKL-2000data scaling
PHENIXrefinement
HKL-2000data processing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2017-08-17 
  • Released Date: 2018-03-14 
  • Deposition Author(s): Jin, H., Cho, Y.

Revision History 

  • Version 1.0: 2018-03-14
    Type: Initial release