Structure and Catalytic Mechanism of a Novel Pyrethroid Hydrolase from Sphingobium faniae JZ-2
Xu, D.Q., Ran, T.T., He, J., Wang, W.W.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Pyrethroid hydrolase | 288 | Sphingobium faniae | Mutation(s): 0  Gene Names: pytH | ||
UniProt | |||||
Find proteins for D0VUS3 (Sphingobium faniae) Explore D0VUS3  Go to UniProtKB:  D0VUS3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D0VUS3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
8NL Query on 8NL | G [auth A] I [auth B] K [auth C] M [auth D] O [auth E] | (2-methyl-3-phenyl-phenyl)methyl (1~{S})-3-[(~{E})-2-chloranyl-3,3,3-tris(fluoranyl)prop-1-enyl]-2,2-dimethyl-cyclopropane-1-carboxylate C23 H22 Cl F3 O2 OMFRMAHOUUJSGP-AZUAARDMSA-N | |||
SO4 Query on SO4 | H [auth A] J [auth B] L [auth C] N [auth D] P [auth E] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 168.857 | α = 90 |
b = 168.857 | β = 90 |
c = 123.864 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
SCALA | data scaling |
PHENIX | phasing |