5Y3U | pdb_00005y3u

NMR-Based Model of the 22 Amino Acid Peptide in Polysialyltransferase Domain (PSTD) of the Polysialyltransferase ST8Sia IV in the Presence of Polysialic Acid (PolySia)

• PDB DOI: https://doi.org/10.2210/pdb5Y3U/pdb
• BMRB: 36110

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2017-07-31 Released: 2017-11-29 
• Deposition Author(s): Liao, S.M., Liu, X.H., Lu, B., Peng, L.X., Chen, D., Huang, R.B., Zhou, G.P.
• Funding Organization(s): Guangxi science and technology cooperation program, The basic research program of Guangxi Academy of Sciences, National Natural Science Foundation of China

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

NMR-Based Model of the 22 Amino Acid Peptide in Polysialyltransferase Domain (PSTD) of the Polysialyltransferase ST8Sia IV in the Presence of Polysialic Acid (PolySia)

Lu, B., Liao, S.M., Lu, Z.L., Liu, X.H., Troy II, F.A., Zhou, G.P., Huang, R.B.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 2.62 kDa 
• Atom Count: 186 
• Modeled Residue Count: 22 
• Deposited Residue Count: 22 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PSTD-22AA-PolySia	A	22	Homo sapiens	Mutation(s): 0  EC: 2.4.99 (PDB Primary Data), 2.4.3 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q92187 (Homo sapiens) Explore Q92187  Go to UniProtKB:  Q92187
PHAROS:  Q92187 GTEx:  ENSG00000113532

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2017-11-29 
Deposition Author(s): Liao, S.M., Liu, X.H., Lu, B., Peng, L.X., Chen, D., Huang, R.B., Zhou, G.P.

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Funding Organization	Location	Grant Number
Guangxi science and technology cooperation program	China	151707
The basic research program of Guangxi Academy of Sciences	China	15YJ22SW02
The basic research program of Guangxi Academy of Sciences	China	2017YJJ2
Guangxi science and technology cooperation program	China	15104001-6
National Natural Science Foundation of China	China	31560251

Revision History  

• Version 1.0: 2017-11-29
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Database references, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references