5Y18

Crystal structure of DAXX helical bundle domain in complex with ATRX

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.202 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.186 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history. 

Literature

Structural basis for DAXX interaction with ATRX

Wang, X., Zhao, Y., Zhang, J., Chen, Y.

(2017) Protein Cell 8: 767-771


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Death domain-associated protein 6
A
95Homo sapiensMutation(s): 0 
Gene Names: DAXX (BING2, DAP6)
Find proteins for Q9UER7 (Homo sapiens)
Go to Gene View: DAXX
Go to UniProtKB:  Q9UER7
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Transcriptional regulator ATRX
B
23Homo sapiensMutation(s): 0 
Gene Names: ATRX (RAD54L, XH2)
EC: 3.6.4.12
Find proteins for P46100 (Homo sapiens)
Go to Gene View: ATRX
Go to UniProtKB:  P46100
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.202 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.186 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 69.485α = 90.00
b = 107.904β = 90.00
c = 30.887γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data scaling
SHARPphasing
HKL-3000data reduction
HKL-3000data collection
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots


View more in-depth experimental data

Entry History 

Deposition Data

  • Deposited Date: 2017-07-19 
  • Released Date: 2018-05-30 
  • Deposition Author(s): Chen, Y., Wang, X.

Revision History 

  • Version 1.0: 2018-05-30
    Type: Initial release