5Y18

Crystal structure of DAXX helical bundle domain in complex with ATRX


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural basis for DAXX interaction with ATRX

Wang, X.Zhao, Y.Zhang, J.Chen, Y.

(2017) Protein Cell 8: 767-771


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Death domain-associated protein 6A95Homo sapiensMutation(s): 0 
Gene Names: DAXXBING2DAP6
Find proteins for Q9UER7 (Homo sapiens)
Explore Q9UER7 
Go to UniProtKB:  Q9UER7
NIH Common Fund Data Resources
PHAROS:  Q9UER7
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Transcriptional regulator ATRXB23Homo sapiensMutation(s): 0 
Gene Names: ATRXRAD54LXH2
EC: 3.6.4.12
Find proteins for P46100 (Homo sapiens)
Explore P46100 
Go to UniProtKB:  P46100
NIH Common Fund Data Resources
PHAROS:  P46100
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
AL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 69.485α = 90
b = 107.904β = 90
c = 30.887γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data collection
HKL-3000data scaling
SHARPphasing
PDB_EXTRACTdata extraction
HKL-3000data reduction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2017-07-19 
  • Released Date: 2018-05-30 
  • Deposition Author(s): Chen, Y., Wang, X.

Revision History  (Full details and data files)

  • Version 1.0: 2018-05-30
    Type: Initial release