5Y18

Crystal structure of DAXX helical bundle domain in complex with ATRX


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 

wwPDB Validation 3D Report Full Report



Literature

Structural basis for DAXX interaction with ATRX

Wang, X.Zhao, Y.Zhang, J.Chen, Y.

(2017) Protein Cell 8: 767-771


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Death domain-associated protein 6A95Homo sapiensMutation(s): 0 
Gene Names: DAXXBING2DAP6
Find proteins for Q9UER7 (Homo sapiens)
Explore Q9UER7 
Go to UniProtKB:  Q9UER7
NIH Common Fund Data Resources
PHAROS  Q9UER7
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Transcriptional regulator ATRXB23Homo sapiensMutation(s): 0 
Gene Names: ATRXRAD54LXH2
EC: 3.6.4.12
Find proteins for P46100 (Homo sapiens)
Explore P46100 
Go to UniProtKB:  P46100
NIH Common Fund Data Resources
PHAROS  P46100
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
AL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 69.485α = 90
b = 107.904β = 90
c = 30.887γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data collection
HKL-3000data scaling
SHARPphasing
PDB_EXTRACTdata extraction
HKL-3000data reduction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2017-07-19 
  • Released Date: 2018-05-30 
  • Deposition Author(s): Chen, Y., Wang, X.

Revision History 

  • Version 1.0: 2018-05-30
    Type: Initial release