5XZU

Crystal structure of GH10 xylanase from Bispora. sp MEY-1 with xylobiose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.183 
  • R-Value Work: 0.124 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of GH10 xylanase from Bispora. sp MEY-1 with xylobiose

Shuai, Y.Chunchi, C.Tao, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-xylanase
A, B
335Bispora sp. MEY-1Mutation(s): 0 
Gene Names: xyl10C
EC: 3.2.1.8
Find proteins for D0QF43 (Bispora sp. MEY-1)
Go to UniProtKB:  D0QF43
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CBI
Query on CBI

Download SDF File 
Download CCD File 
A
CELLOBIOSE
C12 H22 O11
GUBGYTABKSRVRQ-QRZGKKJRSA-N
 Ligand Interaction
NAG
Query on NAG

Download SDF File 
Download CCD File 
A, B
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.183 
  • R-Value Work: 0.124 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 135.274α = 90.00
b = 83.136β = 94.25
c = 65.387γ = 90.00
Software Package:
Software NamePurpose
xia2data reduction
PHASERphasing
REFMACrefinement
xia2data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
the National Natural Science Foundation of ChinaChina31472127

Revision History 

  • Version 1.0: 2018-05-02
    Type: Initial release