5XY1

Crystal structure of Lyn kinase domain in complex with N-(1H-indazol-6-yl)-8-(piperidin-4-yloxy)-6-propylquinazolin-2-amine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.214 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of Lyn kinase domain in complex with N-(1H-indazol-6-yl)-8-(piperidin-4-yloxy)-6-propylquinazolin-2-amine

Kim, H.T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tyrosine-protein kinase Lyn
A
279Homo sapiensMutation(s): 0 
Gene Names: LYN (JTK8)
EC: 2.7.10.2
Find proteins for P07948 (Homo sapiens)
Go to Gene View: LYN
Go to UniProtKB:  P07948
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
8H0
Query on 8H0

Download SDF File 
Download CCD File 
A
N-(1H-indazol-6-yl)-8-piperidin-4-yloxy-6-propyl-quinazolin-2-amine
C23 H26 N6 O
FBHTUGHTOZWUFL-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.214 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 128.864α = 90.00
b = 128.864β = 90.00
c = 55.123γ = 120.00
Software Package:
Software NamePurpose
MOLREPphasing
HKL-2000data reduction
REFMACrefinement
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2017-07-05 
  • Released Date: 2017-08-02 
  • Deposition Author(s): Kim, H.T.

Revision History 

  • Version 1.0: 2017-08-02
    Type: Initial release