5X83

Structure of DCC FN456 domains


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.224 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure of unliganded membrane-proximal domains FN4-FN5-FN6 of DCC

Finci, L.I.Zhang, J.Sun, X.Smock, R.G.Meijers, R.Zhang, Y.Xiao, J.Wang, J.H.

(2017) Protein Cell 8: 701-705


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Netrin receptor DCC AC116Homo sapiensMutation(s): 0 
Gene Names: DCCIGDCC1
Find proteins for P43146 (Homo sapiens)
Explore P43146 
Go to UniProtKB:  P43146
NIH Common Fund Data Resources
PHAROS:  P43146
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Netrin receptor DCC BD207Homo sapiensMutation(s): 0 
Gene Names: DCCIGDCC1
Find proteins for P43146 (Homo sapiens)
Explore P43146 
Go to UniProtKB:  P43146
NIH Common Fund Data Resources
PHAROS:  P43146
Protein Feature View
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.224 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 53.459α = 90
b = 126.971β = 99.68
c = 57.162γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data processing
HKL-2000data scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation of China (NSFC)China81425009
NIH grantChinaHL48675

Revision History  (Full details and data files)

  • Version 1.0: 2017-09-06
    Type: Initial release
  • Version 1.1: 2017-12-13
    Changes: Database references