The Yaf9 YEATS domain Recognizing H3K122suc Peptide
Wang, Y., Hao, Q.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Yaf9 | A | 165 | Saccharomyces cerevisiae RM11-1a | Mutation(s): 3  Gene Names: SCRG_03242, YAF9 | ![]() |
Find proteins for B3LNW5 (Saccharomyces cerevisiae (strain RM11-1a)) Explore B3LNW5  Go to UniProtKB:  B3LNW5 | |||||
Protein Feature ViewExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Yaf9 | B, C | 164 | Saccharomyces cerevisiae RM11-1a | Mutation(s): 3  Gene Names: SCRG_03242, YAF9 | ![]() |
Find proteins for B3LNW5 (Saccharomyces cerevisiae (strain RM11-1a)) Explore B3LNW5  Go to UniProtKB:  B3LNW5 | |||||
Protein Feature ViewExpand | |||||
|
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
ILE-MET-PRO-LYS-ASP-ILE-GLN-LEU | E | 8 | Homo sapiens | Mutation(s): 0  Gene Names:  H3C1, H3FA, HIST1H3A, H3C2, H3FL, HIST1H3B, H3C3, H3FC HIST1H3C, H3C4, H3FB... | ![]() |
Find proteins for P68431 (Homo sapiens) Explore P68431  Go to UniProtKB:  P68431 | |||||
NIH Common Fund Data Resources | |||||
GTEx  ENSG00000197409 | |||||
Protein Feature ViewExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SLL Query on SLL | C | (2S)-2-azanyl-6-[(4-hydroxy-4-oxo-butanoyl)amino]hexanoic acid C10 H18 N2 O5 ZAFOVBXOMIXMTH-ZETCQYMHSA-N | Ligand Interaction | ||
SIN Query on SIN | E | SUCCINIC ACID C4 H6 O4 KDYFGRWQOYBRFD-UHFFFAOYSA-N | Ligand Interaction |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 136.932 | α = 90 |
b = 136.932 | β = 90 |
c = 26.168 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |