5WL2

VH1-69 germline antibody with CDR H3 sequence of CR9114


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.200 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Anti-idiotypic antibody K1-18 engages VH1-69 precursor and affinity-matured, anti-stem antibodies through mimicry of the HA stem.

Wilson, I.A.Lang, S.Kurosawa, Y.Ohshima, N.Ota, T.Abadejos, J.Lee, P.S.Nemazee, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Heavy chain of VH1-69 germline antibody with CDR H3 sequence of CR9114
H, A
230N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Germline-reverted light chain of CR9114
L, B
216N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.200 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 71.125α = 90.00
b = 71.125β = 90.00
c = 185.705γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
SCALEPACKdata scaling
PHENIXrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2017-07-25 
  • Released Date: 2018-08-01 
  • Deposition Author(s): Wilson, I.A., Lang, S.

Funding OrganizationLocationGrant Number
United StatesR56 AI 117675

Revision History 

  • Version 1.0: 2018-08-01
    Type: Initial release