5W6W

Designing Higher Resolution Self-Assembled 3D DNA Crystals via Strand Terminus Modifications


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.06 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.223 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Designing Higher Resolution Self-Assembled 3D DNA Crystals via Strand Terminus Modifications

Hernandez, C.Birktoft, J.J.Seeman, N.C.Ohayon, Y.P.Chandrasekaran, A.R.Abdalla, H.O.Mohsen, M.Sha, R.Chenge, M.Lukeman, P.S.Chaikin, P.Ginell, S.L.Jong, M.A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3')A21synthetic construct
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3')B7synthetic construct
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(P*GP*GP*CP*TP*GP*CP*T)-3')C7synthetic construct
Entity ID: 4
MoleculeChainsLengthOrganism
DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3')D7synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.06 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.223 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 106.712α = 90.00
b = 106.712β = 90.00
c = 94.081γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
SCALEPACKdata scaling
HKL-2000data reduction
PDB_EXTRACTdata extraction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of HealthUnited States--

Revision History 

  • Version 1.0: 2018-06-27
    Type: Initial release